Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq132974 125 1e-26 seq143168 75.2 2e-11 >seq132974 Length=140 Score = 125 bits (138), Expect = 1e-26 Identities = 104/127 (82%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181 || ||| |||||| || ||| | ||||||||||||||||||| ||||||||||| | | Sbjct 130 CAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCATTTTGCCTAGT 71 Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241 ||||| ||| ||||| | | | |||||| |||||||||||| |||||||||||||||| Sbjct 70 TCCTTCACCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCACCTGTGTCGGTT 11 Query 242 TACGGTA 248 | |||| Sbjct 10 TGGGGTA 4 >seq143168 Length=1062 Score = 75.2 bits (82), Expect = 2e-11 Identities = 69/86 (80%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| |||||| |||||||||||||||| || ||||| || |||| ||| || ||| Sbjct 954 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT-TCGTGTTTGCAGA 1012 Query 62 GACCTGTGTTTTTAGTAAACAGTCGC 87 | ||||||||||| ||||||||||| Sbjct 1013 GTGCTGTGTTTTTAATAAACAGTCGC 1038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693175470736