Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crepidotus_20sp._20BD-2015_20[genbank_20GCA_5F001179765.1_202015-07- 08] 182,032 sequences; 70,257,325 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq177628 203 3e-47 seq32941 102 6e-17 seq157148 100 2e-16 seq180125 98.7 8e-16 >seq177628 Length=4820 Score = 203 bits (224), Expect = 3e-47 Identities = 395/576 (69%), Gaps = 13/576 (2%) Strand=Plus/Minus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 || |||| |||||||||||||| | || | ||||||||| | |||||| | || | Sbjct 3534 ATATGGCAAATGTACAAAAAGGCCCAGGCCTGCTTCTGGACTGCAGAGGAGATAGACCTC 3475 Query 61147 TCCAAAGACATGAATGACTGGG--AGCGT--TTATCGAGCGGTGAACAACATTTCATTAA 61202 ||| | ||| | |||||| ||| | | || | |||| ||||| ||| Sbjct 3474 TCCCACGACGTTCTCGACTGGACAAGCAACCTCAACGC-CAACGAACGCCATTTTATTTC 3416 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| ||||| ||||| ||||| |||||||| |||||||| ||||| | |||| || Sbjct 3415 CCATGTCTTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTCCTGGAGCG 3356 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| | || || || | | || || || || ||||| || || || || || Sbjct 3355 TTTCTCAAGCGAAGTTCAGGCCGCAGAAGCCCGCTGCTTCTATGGTTTTCAAATCATGAT 3296 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||| || | ||||| |||| |||| | |||||||| ||||| || | || | || Sbjct 3295 GGAAAACATTCACTCCGAGACGTACTCGCTCCTCATCGACACGTATATTCGTGATCCTGC 3236 Query 61383 GGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGA 61442 ||||| || ||||| ||||| | |||||||| || | ||||| ||||| || Sbjct 3235 TGAACGGGAGTATCTGTTCGATGCCGTGGAGACGATCCCATGTATCAAGCGCAAAGCTGA 3176 Query 61443 TTGGGCCTTCAATTGGATCACCAGTACAACGGCTACA--TTTGGTGAACGATTGCTGGCA 61500 ||||| |||| |||||| | | |||| | | || |||| || || ||| |||| Sbjct 3175 CTGGGCTCTCAAGTGGATCTC--GGACAAACGTTCCACCTTTGCCGAGCGCTTGGTGGCT 3118 Query 61501 TTTGCGGTGGTCGAGGGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 || |||| || || ||| |||| |||||| | || |||||| | || || ||| | | Sbjct 3117 TTCGCGGCCGTTGAAGGTATATTCTTTTCAGGG--TCATTTGCCTCCATTTTCTGGATCA 3060 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGG 61618 | || || || |||||||| || |||| ||| |||||| | || |||||||||| Sbjct 3059 AAAAGCGGGGGCTTATGCCGGGATTGACATTCTCGAATGAGCTCATCAGCCGCGACGAGG 3000 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAAC 61654 ||||||| |||||||| ||||| |||| || Sbjct 2999 GCATGCACACCGATTTTGCATGCTTGCTCTTCACAC 2964 Score = 152 bits (168), Expect = 4e-32 Identities = 220/309 (71%), Gaps = 5/309 (2%) Strand=Plus/Plus Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146 ||||||| ||||| || ||||| ||||||||||||||||| | |||||| | || || Sbjct 4503 ATTTGGCAAATGTATAAGAAGGCCGAAGCTTCCTTCTGGACCGCCGAGGAGATGGACCTG 4562 Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202 || || |||||| | |||||| | | | | || || || | || ||||| Sbjct 4563 TCGAAGGACATGCACGACTGGAACAACAAGCTCAACGC-CGACGAGCGSCACTTCATCTC 4621 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| | || || || || || || ||||| || ||||| ||||| | | || || Sbjct 4622 YCATGTCCTCGCCTTTTTCGCTGCGTCCGACGGCATTGTCAACGAGAACCTGCTCGAGCG 4681 Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCAT 61322 |||| || | || ||||| || | ||||| ||||| |||||||||||||||||| || Sbjct 4682 TTTCTCGAACGAAGTGCAGGTCGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATTATGAT 4741 Query 61323 GGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGC 61382 ||||||| | ||||| |||| ||| | | | ||||| || ||||||| |||| || Sbjct 4742 GGAGAATATTCACTCCGAGACATACTCTCTGTTGATCGACACATACATCAAAGAGCCCGC 4801 Query 61383 GGAACGTGA 61391 || || || Sbjct 4802 AGAGCGCGA 4810 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 ||||| | |||||| ||||| ||||||||| ||| |||| ||||| |||||| Sbjct 2829 GACGCACTTCCCGTCGACCTCATTGGCATGAATGCCAAACTGATGTGCCAGTACATTGAA 2770 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCG-ATTTGGGTATGAAGCGGATCTATAATACGAAA-- 61854 ||||| || || || || | |||| | ||||| | ||| || | || ||| | Sbjct 2769 TTTGTGGCGGATCGCCTTCTCGTCGCACTTGGGAACGAAAAGG---TGTACCACGCATCC 2713 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 || || || || |||||||||||||| |||||| | || || || || ||||| ||||| Sbjct 2712 AATCCTTTCGACTTCATGGACATGATCTCGCTGCAAGGGAAAACCAACTTTTTTGAGAAG 2653 Query 61915 CGTGTA 61920 || ||| Sbjct 2652 CGGGTA 2647 >seq32941 Length=300 Score = 102 bits (112), Expect = 6e-17 Identities = 124/165 (75%), Gaps = 8/165 (5%) Strand=Plus/Plus Query 61211 TGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGC 61270 |||| |||||||| || || ||||| |||||||| ||||||||| ||| | || ||| Sbjct 109 TGGCCTTCTTTGCAGCCTCCGACGGCATCGTCAACGAGAATTTAGTGGCGAGGTTTGCGA 168 Query 61271 AGGAGGTGCAAGTGT-CGGAGGCGCGTTGTTTCTACGGCTTCCA---GATTGCCATGGAG 61326 | || || || |||| |||| || || || |||| ||||| || ||| ||||| Sbjct 169 ATGAAGTACA-GTGTGCGGAAGCTCGCTGCTTCTTTGGCTTTCAAGCGATG---ATGGAA 224 Query 61327 AATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATC 61371 || |||||||||||| ||| | | |||||||||||||||||| Sbjct 225 AACATCCACTCGGAGACCTACTCTCTCCTCATCGATACGTACATC 269 >seq157148 Length=126 Score = 100 bits (110), Expect = 2e-16 Identities = 96/122 (79%), Gaps = 6/122 (5%) Strand=Plus/Minus Query 66356 ATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG---TTGCTCCTCAATGCCGTGATTTTTG 66412 |||||||| || |||| | || || || | |||||||| | || ||||||||| Sbjct 126 ATCCAGAGCGCCAAGAACAAGTCTCGGGCGTGCATTTGCTCCT---TCCCATGATTTTTG 70 Query 66413 CGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAG 66472 |||| ||||| ||||| || |||||||| ||||||||||| |||||||||||||||| | Sbjct 69 CGCAGGTCGATAAACTCGAATATGTCGGCGTGCCATGGTTCGAGGTAGATGGCGAACGCG 10 Query 66473 CC 66474 || Sbjct 9 CC 8 >seq180125 Length=1791 Score = 98.7 bits (108), Expect = 8e-16 Identities = 123/168 (73%), Gaps = 8/168 (5%) Strand=Plus/Minus Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 |||||||||||||| || |||| ||||| || || ||||| || ||||| || Sbjct 1592 CTCATCGGCATGAACGCCACGCTCATGTGCCAGTACATCGAGTTTGTCGCTGACCGCCTC 1533 Query 61816 TTGGTCGATTTGGGTA----TGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCAT 61871 | |||| | | || | | ||| |||| ||| || |||||| || |||||||| Sbjct 1532 CTAGTCGCTCTCGGCAACGATAAAG----TCTACAATTCGGCAAACCCTTTCGATTTCAT 1477 Query 61872 GGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGT 61919 ||| |||||||| ||| | ||||||||||| ||||||||||| || || Sbjct 1476 GGATATGATTTCCCTGCAAGGCAAGACGAACTTTTTCGAGAAGCGCGT 1429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396685989428480