Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq54 179 7e-43 seq73 143 5e-32 seq14 109 1e-21 >seq54 Length=52904 Score = 179 bits (198), Expect = 7e-43 Identities = 128/146 (88%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||| ||||||| ||| |||| || || | ||| | || ||| ||||||| ||||| | Sbjct 1479 TCCGGTTGGGCCTTACCTCCTGGTGAGCCCGTATGTCGTTTACTCGGTGTGCGGGGGAAC 1538 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTA 126 ||||| |||||||||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct 1539 CAGGAATTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCATATGCCCGAATACATTA 1598 Query 127 GCATGGAATAATAGAATAGGACGTGC 152 |||||||||||||||||||||||||| Sbjct 1599 GCATGGAATAATAGAATAGGACGTGC 1624 >seq73 Length=46184 Score = 143 bits (158), Expect = 5e-32 Identities = 108/126 (86%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 ||||||| || ||||| | |||||||| ||| ||||||||||||||| |||||| || Sbjct 1 ATAGGGACGGTTGGGGGCATTAGTATTCAGTTGCTAGAGGTGAAATTCTTAGATTTACTG 60 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||||||||||||||||||| || ||||||| |||||||||||||| ||||||| || Sbjct 61 AAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAGGT 119 Query 313 TAGGGG 318 |||||| Sbjct 120 TAGGGG 125 >seq14 Length=72078 Score = 109 bits (120), Expect = 1e-21 Identities = 85/100 (85%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 8 TCCGGCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGC 66 ||||| ||||||| ||| |||| || || | ||| | || ||| ||||||| ||||| | Sbjct 100 TCCGGTTGGGCCTTACCTCCTGGTGAGCCCGTATGTCGTTTACTCGGTGTGCGGGGGAAC 41 Query 67 CAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG 106 ||||| |||||||||||||||||||||||||||||||||| Sbjct 40 CAGGAATTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915192367232