Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq750 385 2e-104 seq729 309 1e-81 seq811 233 8e-59 seq809 230 1e-57 seq796 226 1e-56 seq810 224 4e-56 seq799 224 4e-56 seq94 118 4e-24 >seq750 Length=577 Score = 385 bits (426), Expect = 2e-104 Identities = 269/305 (88%), Gaps = 1/305 (0%) Strand=Plus/Minus Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 ||||||| || | |||||| | ||| || ||||||||| ||||||||||||||||||||| Sbjct 525 TAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 466 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 ||| | ||||||| ||||||||||||||||| | ||| |||||||||||||| ||| | | Sbjct 465 CATATCTGCGAGTATTTGGGTGTCAAACCCGAGTGCGCAATGAAAGTGAACGTAGGAGCG 406 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 || ||| ||| |||| | |||||||||| ||| | | ||||||||||||||||||| Sbjct 405 AATCCGCAAGG-TGCAGCTTCGACCGATCTGGATCTTTAGTGATGGATTTGAGTAAGAGC 347 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 346 ATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 287 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| Sbjct 286 CTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 227 Query 679 GGCGA 683 ||||| Sbjct 226 GGCGA 222 >seq729 Length=606 Score = 309 bits (342), Expect = 1e-81 Identities = 394/535 (74%), Gaps = 43/535 (8%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||||| | | ||| ||||||||||||||||||||||||||||| ||||||| ||| ||| Sbjct 84 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 143 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||| |||||| Sbjct 144 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 203 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||||||||||||||||| || |||||||||||||| ||||||| || || Sbjct 204 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTG-AAGGGAAACGATT 262 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCA-CTCTTCTGCGG 261 | | ||| | ||| | || | | ||| || | ||||| | || | || | Sbjct 263 GAAGTCAGTCATGCTCTTAG-----GATTCAGCCGTTCTG-CGGTGTATTTCCTTTG-AG 315 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 | || || |||||| | | || | |||||||||| | |||| || || | | ||||| Sbjct 316 TGGGGTCAACATCAGTTTGATCGAT-GGATAAAGGCACGAGGAAGGTAGCACTC-TCGGG 373 Query 322 GGGTGTTATAGCC-CGGG---------------------GTGGAATGCGGCCCGCC---- 355 | |||||||| || | | |||| || || ||| Sbjct 374 TGAACTTATAGCCTCGCGTCATATACATTGATTGGGACTGAGGAACGCAGCATGCCTTTA 433 Query 356 TGGACTG---AGGTCCGCGCTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411 ||| | | |||| || | || ||||||| || | |||||| | ||| || |||| Sbjct 434 TGGCCGGGATTCGTCCACGTACATGCTTAGGATGTTGACATAATGGCTTTAAACGACCCG 493 Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTG 471 ||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||| | Sbjct 494 TCTTGAAACACGGACCAAGGAGTCTAACATATCTGCGAGTATTTGGGTGTCAAACCCGAG 553 Query 472 CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526 ||| |||||||||||||| ||| | || || | |||||| | ||||||||| Sbjct 554 TGCGCAATGAAAGTGAACGTAGGAGCGATCC--GCAAGGTGCAGCTTCGACCGAT 606 >seq811 Length=506 Score = 233 bits (258), Expect = 8e-59 Identities = 159/179 (89%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97 ||||||||||||||||||||||||||||| ||||||| ||| |||| | ||||||||||| Sbjct 265 ACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAATTCCATCTAAAGCTAA 206 Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157 |||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||| Sbjct 205 ATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGG 146 Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216 ||||||||||||| || |||||||||||||||||||||| || ||| | ||| | ||| Sbjct 145 AAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCATGC 87 >seq809 Length=506 Score = 230 bits (254), Expect = 1e-57 Identities = 162/184 (88%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAA 92 ||| ||||||||||||||||||||||||||||| ||| |||| ||| |||| | |||||| Sbjct 270 TTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAATTCCATCTAAA 211 Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152 ||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||| Sbjct 210 GCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCAC 151 Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212 |||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| | Sbjct 150 TTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTC 91 Query 213 TTGC 216 ||| Sbjct 90 ATGC 87 >seq796 Length=517 Score = 226 bits (250), Expect = 1e-56 Identities = 159/180 (88%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTA 96 ||||||||||||||||||||||||||||| ||| |||| ||| |||| | |||||||||| Sbjct 184 ACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAATTCCATCTAAAGCTA 243 Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156 ||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||| Sbjct 244 AATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTG 303 Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216 |||||||||||||| || |||||||||||||||||||||| || ||| | ||| | ||| Sbjct 304 GAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCATGC 363 >seq810 Length=506 Score = 224 bits (248), Expect = 4e-56 Identities = 169/196 (86%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAA 81 ||||| | | ||| ||||||||||||||||||||||||||||| ||| |||| ||| || Sbjct 282 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAA 223 Query 82 TTTCTTCTAAA-GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140 || | |||||| ||||||||||||| |||||||||||||| ||||||| |||| |||| Sbjct 222 TTCCATCTAAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAA 163 Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 |||||||||||||||||||||||||||||| || |||||||||||||||||||||| || Sbjct 162 GATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGA 103 Query 201 TTGCAACCAGACTTGC 216 ||| | ||| | ||| Sbjct 102 TTGAAGTCAGTCATGC 87 >seq799 Length=515 Score = 224 bits (248), Expect = 4e-56 Identities = 169/196 (86%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAA 81 ||||| | | ||| ||||||||||||||||||||||||||||| ||| |||| ||| || Sbjct 167 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAA 226 Query 82 TTTCTTCTAAAGCTAAA-TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140 || | |||||||||||| ||||||| |||||||||||||| ||||||| |||| |||| Sbjct 227 TTCCATCTAAAGCTAAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAA 286 Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 |||||||||||||||||||||||||||||| || |||||||||||||||||||||| || Sbjct 287 GATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGA 346 Query 201 TTGCAACCAGACTTGC 216 ||| | ||| | ||| Sbjct 347 TTGAAGTCAGTCATGC 362 >seq94 Length=37221 Score = 118 bits (130), Expect = 4e-24 Identities = 89/105 (85%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 579 GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGC 638 |||||||||||||||||| ||||| ||| ||||| || | ||||||||||||||| | | Sbjct 9603 GATGGTGAACTATGCCTGTGTAGGGCGAATCCAGATGACATTCTGGTGGAGGCTCGTAAC 9544 Query 639 GGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | ||||| |||||||||||| | ||||||||||| ||| ||||| Sbjct 9543 GATTCTGACGTGCAAATCGAAGGGCAAATTTGGGTGTAGAGGCGA 9499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079982110700