Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq750 385 2e-104
seq729 309 1e-81
seq811 233 8e-59
seq809 230 1e-57
seq796 226 1e-56
seq810 224 4e-56
seq799 224 4e-56
seq94 118 4e-24
>seq750
Length=577
Score = 385 bits (426), Expect = 2e-104
Identities = 269/305 (88%), Gaps = 1/305 (0%)
Strand=Plus/Minus
Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438
||||||| || | |||||| | ||| || ||||||||| |||||||||||||||||||||
Sbjct 525 TAGGATGTTGACATAATGGCTTTAAACGACCCGTCTTGAAACACGGACCAAGGAGTCTAA 466
Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498
||| | ||||||| ||||||||||||||||| | ||| |||||||||||||| ||| | |
Sbjct 465 CATATCTGCGAGTATTTGGGTGTCAAACCCGAGTGCGCAATGAAAGTGAACGTAGGAGCG 406
Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558
|| ||| ||| |||| | |||||||||| ||| | | |||||||||||||||||||
Sbjct 405 AATCCGCAAGG-TGCAGCTTCGACCGATCTGGATCTTTAGTGATGGATTTGAGTAAGAGC 347
Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618
||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 346 ATATATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCAGAGGAAA 287
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
|||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 286 CTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGTCAAATTTGGGTATAGG 227
Query 679 GGCGA 683
|||||
Sbjct 226 GGCGA 222
>seq729
Length=606
Score = 309 bits (342), Expect = 1e-81
Identities = 394/535 (74%), Gaps = 43/535 (8%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||||| | | ||| ||||||||||||||||||||||||||||| ||||||| ||| |||
Sbjct 84 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAAT 143
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
| | ||||||||||||||||||| |||||||||||||| ||||||| |||| ||||||
Sbjct 144 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGA 203
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||||||||||||||||| || |||||||||||||| ||||||| || ||
Sbjct 204 TGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTG-AAGGGAAACGATT 262
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCA-CTCTTCTGCGG 261
| | ||| | ||| | || | | ||| || | ||||| | || | || |
Sbjct 263 GAAGTCAGTCATGCTCTTAG-----GATTCAGCCGTTCTG-CGGTGTATTTCCTTTG-AG 315
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
| || || |||||| | | || | |||||||||| | |||| || || | | |||||
Sbjct 316 TGGGGTCAACATCAGTTTGATCGAT-GGATAAAGGCACGAGGAAGGTAGCACTC-TCGGG 373
Query 322 GGGTGTTATAGCC-CGGG---------------------GTGGAATGCGGCCCGCC---- 355
| |||||||| || | | |||| || || |||
Sbjct 374 TGAACTTATAGCCTCGCGTCATATACATTGATTGGGACTGAGGAACGCAGCATGCCTTTA 433
Query 356 TGGACTG---AGGTCCGCGCTCCGGC-TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCG 411
||| | | |||| || | || ||||||| || | |||||| | ||| || ||||
Sbjct 434 TGGCCGGGATTCGTCCACGTACATGCTTAGGATGTTGACATAATGGCTTTAAACGACCCG 493
Query 412 TCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTG 471
||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||| |
Sbjct 494 TCTTGAAACACGGACCAAGGAGTCTAACATATCTGCGAGTATTTGGGTGTCAAACCCGAG 553
Query 472 CGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGAT 526
||| |||||||||||||| ||| | || || | |||||| | |||||||||
Sbjct 554 TGCGCAATGAAAGTGAACGTAGGAGCGATCC--GCAAGGTGCAGCTTCGACCGAT 606
>seq811
Length=506
Score = 233 bits (258), Expect = 8e-59
Identities = 159/179 (89%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAA 97
||||||||||||||||||||||||||||| ||||||| ||| |||| | |||||||||||
Sbjct 265 ACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAATGGGTGGTGAATTCCATCTAAAGCTAA 206
Query 98 ATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGG 157
|||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||
Sbjct 205 ATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGG 146
Query 158 AAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216
||||||||||||| || |||||||||||||||||||||| || ||| | ||| | |||
Sbjct 145 AAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCATGC 87
>seq809
Length=506
Score = 230 bits (254), Expect = 1e-57
Identities = 162/184 (88%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAA 92
||| ||||||||||||||||||||||||||||| ||| |||| ||| |||| | ||||||
Sbjct 270 TTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAATTCCATCTAAA 211
Query 93 GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCAC 152
||||||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||
Sbjct 210 GCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCAC 151
Query 153 TTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGAC 212
|||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 150 TTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTC 91
Query 213 TTGC 216
|||
Sbjct 90 ATGC 87
>seq796
Length=517
Score = 226 bits (250), Expect = 1e-56
Identities = 159/180 (88%), Gaps = 1/180 (1%)
Strand=Plus/Plus
Query 38 ACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTA 96
||||||||||||||||||||||||||||| ||| |||| ||| |||| | ||||||||||
Sbjct 184 ACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAATTCCATCTAAAGCTA 243
Query 97 AATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
||||||||| |||||||||||||| ||||||| |||| ||||||||||||||||||||
Sbjct 244 AATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTG 303
Query 157 GAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGC 216
|||||||||||||| || |||||||||||||||||||||| || ||| | ||| | |||
Sbjct 304 GAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCATGC 363
>seq810
Length=506
Score = 224 bits (248), Expect = 4e-56
Identities = 169/196 (86%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAA 81
||||| | | ||| ||||||||||||||||||||||||||||| ||| |||| ||| ||
Sbjct 282 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAA 223
Query 82 TTTCTTCTAAA-GCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140
|| | |||||| ||||||||||||| |||||||||||||| ||||||| |||| ||||
Sbjct 222 TTCCATCTAAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAA 163
Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200
|||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 162 GATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGA 103
Query 201 TTGCAACCAGACTTGC 216
||| | ||| | |||
Sbjct 102 TTGAAGTCAGTCATGC 87
>seq799
Length=515
Score = 224 bits (248), Expect = 4e-56
Identities = 169/196 (86%), Gaps = 2/196 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAA 81
||||| | | ||| ||||||||||||||||||||||||||||| ||| |||| ||| ||
Sbjct 167 TGTGATACACTTTCAACGAGTCGAGTTGTTTGGGAATGCAGCTCAAAAATGGGTGGTGAA 226
Query 82 TTTCTTCTAAAGCTAAA-TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAA 140
|| | |||||||||||| ||||||| |||||||||||||| ||||||| |||| ||||
Sbjct 227 TTCCATCTAAAGCTAAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAA 286
Query 141 GATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200
|||||||||||||||||||||||||||||| || |||||||||||||||||||||| ||
Sbjct 287 GATGAAAAGCACTTTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGA 346
Query 201 TTGCAACCAGACTTGC 216
||| | ||| | |||
Sbjct 347 TTGAAGTCAGTCATGC 362
>seq94
Length=37221
Score = 118 bits (130), Expect = 4e-24
Identities = 89/105 (85%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 579 GATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGC 638
|||||||||||||||||| ||||| ||| ||||| || | ||||||||||||||| | |
Sbjct 9603 GATGGTGAACTATGCCTGTGTAGGGCGAATCCAGATGACATTCTGGTGGAGGCTCGTAAC 9544
Query 639 GGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| ||||| |||||||||||| | ||||||||||| ||| |||||
Sbjct 9543 GATTCTGACGTGCAAATCGAAGGGCAAATTTGGGTGTAGAGGCGA 9499
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079982110700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |