Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq791 457 2e-126 seq785 457 2e-126 seq702 450 2e-124 seq631 228 1e-57 seq195 192 1e-46 seq798 95.1 2e-17 >seq791 Length=524 Score = 457 bits (506), Expect = 2e-126 Identities = 261/265 (98%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 429 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 370 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 369 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 310 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 309 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 250 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 249 TGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGC 190 Query 272 CACACTTTCATGGTTTGT-ATTCAC 295 |||||||||||||||||| |||||| Sbjct 189 CACACTTTCATGGTTTGTAATTCAC 165 >seq785 Length=531 Score = 457 bits (506), Expect = 2e-126 Identities = 261/265 (98%), Gaps = 1/265 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 280 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 221 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 220 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 161 Query 152 ATCGAAGGA-TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 160 ATCGAAGGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 101 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct 100 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGG 41 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 40 CCACACTTTCATGGTTTGTATTCAC 16 >seq702 Length=668 Score = 450 bits (498), Expect = 2e-124 Identities = 261/266 (98%), Gaps = 2/266 (1%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 417 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 358 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 298 Query 152 ATCGAAGG-ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 ATCGAAGGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 238 Query 211 C-TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 237 CTTGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAG 178 Query 270 GCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||| Sbjct 177 GCCACACTTTCATGGTTTGTATTCAC 152 >seq631 Length=804 Score = 228 bits (252), Expect = 1e-57 Identities = 128/129 (99%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 129 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 70 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 10 Query 152 ATCGAAGGA 160 ||||||||| Sbjct 9 ATCGAAGGA 1 >seq195 Length=18362 Score = 192 bits (212), Expect = 1e-46 Identities = 169/223 (76%), Gaps = 42/223 (19%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| || Sbjct 13023 ATCAGTAGGGTAAAACTAACCTGTCACACGACGGTCTAAACCCAGCTCACGTTCCCTGTT 12964 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 12963 AGTGGGTGACCAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGGAGAGCC---- 12908 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| |||| Sbjct 12907 --------------------------------------CTGCCACAAGCCAGTTACCCCT 12886 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255 ||||||||||||||||||||||| | ||| || | | |||||| Sbjct 12885 GTGGTAACTTTTCTGGCACCTCTTGACTCGAACTCCAAGGGAC 12843 >seq798 Length=516 Score = 95.1 bits (104), Expect = 2e-17 Identities = 55/57 (96%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CTCGAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 57 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854392874304