Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq791 457 2e-126
seq785 457 2e-126
seq702 450 2e-124
seq631 228 1e-57
seq195 192 1e-46
seq798 95.1 2e-17
>seq791
Length=524
Score = 457 bits (506), Expect = 2e-126
Identities = 261/265 (98%), Gaps = 1/265 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 429 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 370
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 369 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 310
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 309 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 250
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 249 TGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGGC 190
Query 272 CACACTTTCATGGTTTGT-ATTCAC 295
|||||||||||||||||| ||||||
Sbjct 189 CACACTTTCATGGTTTGTAATTCAC 165
>seq785
Length=531
Score = 457 bits (506), Expect = 2e-126
Identities = 261/265 (98%), Gaps = 1/265 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 280 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 221
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 220 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 161
Query 152 ATCGAAGGA-TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 160 ATCGAAGGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 101
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 100 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAGG 41
Query 271 CCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||
Sbjct 40 CCACACTTTCATGGTTTGTATTCAC 16
>seq702
Length=668
Score = 450 bits (498), Expect = 2e-124
Identities = 261/266 (98%), Gaps = 2/266 (1%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 417 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 358
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 357 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 298
Query 152 ATCGAAGG-ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCGAAGGAATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 238
Query 211 C-TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269
| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 237 CTTGTGGTAACTTTTCTGGCACCTCTAGCCTCGAATTCCGAGGGACTAAAGGATCGATAG 178
Query 270 GCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||
Sbjct 177 GCCACACTTTCATGGTTTGTATTCAC 152
>seq631
Length=804
Score = 228 bits (252), Expect = 1e-57
Identities = 128/129 (99%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 129 CATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTAT 70
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 69 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 10
Query 152 ATCGAAGGA 160
|||||||||
Sbjct 9 ATCGAAGGA 1
>seq195
Length=18362
Score = 192 bits (212), Expect = 1e-46
Identities = 169/223 (76%), Gaps = 42/223 (19%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||
Sbjct 13023 ATCAGTAGGGTAAAACTAACCTGTCACACGACGGTCTAAACCCAGCTCACGTTCCCTGTT 12964
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 12963 AGTGGGTGACCAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGGAGAGCC---- 12908
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
||||||||||||||||| ||||
Sbjct 12907 --------------------------------------CTGCCACAAGCCAGTTACCCCT 12886
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255
||||||||||||||||||||||| | ||| || | | ||||||
Sbjct 12885 GTGGTAACTTTTCTGGCACCTCTTGACTCGAACTCCAAGGGAC 12843
>seq798
Length=516
Score = 95.1 bits (104), Expect = 2e-17
Identities = 55/57 (96%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CTCGAATTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 57
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854392874304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |