Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq54 181 1e-43
seq14 107 2e-21
>seq54
Length=52904
Score = 181 bits (200), Expect = 1e-43
Identities = 123/137 (90%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 29 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACT 88
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1624 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCATATGCCTGCTTTGAACACT 1565
Query 89 CTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATGAA--GGCATACGGGC 146
|||||||| |||| |||||| |||||||||| ||||||||| | || | |||||||||
Sbjct 1564 CTAATTTTTTCAAAGTAAAATTCCTGGTTCCCCCGCACACCGAGTAAACGACATACGGGC 1505
Query 147 TCACCAAGAGGTAGGGC 163
|||||| |||||| |||
Sbjct 1504 TCACCAGGAGGTAAGGC 1488
>seq14
Length=72078
Score = 107 bits (118), Expect = 2e-21
Identities = 79/91 (87%), Gaps = 2/91 (2%)
Strand=Plus/Plus
Query 75 CTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATGA 134
|||||||||||||||||||||| |||| |||||| |||||||||| ||||||||| | |
Sbjct 1 CTGCTTTGAACACTCTAATTTTTTCAAAGTAAAATTCCTGGTTCCCCCGCACACCGAGTA 60
Query 135 A--GGCATACGGGCTCACCAAGAGGTAGGGC 163
| | ||||||||||||||| |||||| |||
Sbjct 61 AACGACATACGGGCTCACCAGGAGGTAAGGC 91
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595195191156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |