Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq54 181 1e-43 seq14 107 2e-21 >seq54 Length=52904 Score = 181 bits (200), Expect = 1e-43 Identities = 123/137 (90%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 29 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAAGCCTGCTTTGAACACT 88 |||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| Sbjct 1624 GCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCATATGCCTGCTTTGAACACT 1565 Query 89 CTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATGAA--GGCATACGGGC 146 |||||||| |||| |||||| |||||||||| ||||||||| | || | ||||||||| Sbjct 1564 CTAATTTTTTCAAAGTAAAATTCCTGGTTCCCCCGCACACCGAGTAAACGACATACGGGC 1505 Query 147 TCACCAAGAGGTAGGGC 163 |||||| |||||| ||| Sbjct 1504 TCACCAGGAGGTAAGGC 1488 >seq14 Length=72078 Score = 107 bits (118), Expect = 2e-21 Identities = 79/91 (87%), Gaps = 2/91 (2%) Strand=Plus/Plus Query 75 CTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACACCAATGA 134 |||||||||||||||||||||| |||| |||||| |||||||||| ||||||||| | | Sbjct 1 CTGCTTTGAACACTCTAATTTTTTCAAAGTAAAATTCCTGGTTCCCCCGCACACCGAGTA 60 Query 135 A--GGCATACGGGCTCACCAAGAGGTAGGGC 163 | | ||||||||||||||| |||||| ||| Sbjct 61 AACGACATACGGGCTCACCAGGAGGTAAGGC 91 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595195191156