Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq682 82.4 5e-14 seq141 71.6 1e-10 >seq682 Length=694 Score = 82.4 bits (90), Expect = 5e-14 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || ||||||| ||||||||||||| |||||| | | |||||||||||||| | ||| Sbjct 328 TAACTTTTATTTCTTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTA 387 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118 ||| || | |||| | | || | ||| ||| ||||||| ||||||| || |||| Sbjct 388 CTTACGTACCTGCGCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTGCCTTTACACT 445 >seq141 Length=26944 Score = 71.6 bits (78), Expect = 1e-10 Identities = 88/119 (74%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||| ||||||||||||| |||||| | | |||||||||||||| | ||| Sbjct 2331 TAACTTTTAATTCTTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTA 2272 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCA-CACTTTTGCCATTGCACT 118 ||| || | |||| | | || | ||| ||| ||||||| ||||||| || |||| Sbjct 2271 CTTACGTACCTGCGCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTTGCCTTTACACT 2213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351997247800