Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01001851.1
Length=140
Score E
Sequences producing significant alignments: (Bits) Value
seq682 82.4 5e-14
seq141 71.6 1e-10
>seq682
Length=694
Score = 82.4 bits (90), Expect = 5e-14
Identities = 89/118 (75%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| ||||||| ||||||||||||| |||||| | | |||||||||||||| | |||
Sbjct 328 TAACTTTTATTTCTTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTA 387
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACT 118
||| || | |||| | | || | ||| ||| ||||||| ||||||| || ||||
Sbjct 388 CTTACGTACCTGCGCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTGCCTTTACACT 445
>seq141
Length=26944
Score = 71.6 bits (78), Expect = 1e-10
Identities = 88/119 (74%), Gaps = 1/119 (1%)
Strand=Plus/Minus
Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60
|| |||||| ||||||||||||| |||||| | | |||||||||||||| | |||
Sbjct 2331 TAACTTTTAATTCTTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTA 2272
Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCA-CACTTTTGCCATTGCACT 118
||| || | |||| | | || | ||| ||| ||||||| ||||||| || ||||
Sbjct 2271 CTTACGTACCTGCGCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTTGCCTTTACACT 2213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351997247800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |