Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq682 91.5 1e-16 seq141 84.2 2e-14 >seq682 Length=694 Score = 91.5 bits (100), Expect = 1e-16 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||||||||||| |||||| |||||||||||||||||| | ||| ||| || |||||| Sbjct 341 TTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTACTTACGTACCTGC 400 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129 ||| | | ||| |||||||||| | || |||| || |||| Sbjct 401 GCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTGCCTTTACACT 445 >seq141 Length=26944 Score = 84.2 bits (92), Expect = 2e-14 Identities = 83/106 (78%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84 ||||||||||||| |||||| |||||||||||||||||| | ||| ||| || |||||| Sbjct 2318 TTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTACTTACGTACCTGC 2259 Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAG-CTTATGCCATTGCACT 129 ||| | | ||| |||||||||| | || |||| || |||| Sbjct 2258 GCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTTGCCTTTACACT 2213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473596173608