Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01001946.1
Length=179
Score E
Sequences producing significant alignments: (Bits) Value
seq682 91.5 1e-16
seq141 84.2 2e-14
>seq682
Length=694
Score = 91.5 bits (100), Expect = 1e-16
Identities = 83/105 (79%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
||||||||||||| |||||| |||||||||||||||||| | ||| ||| || ||||||
Sbjct 341 TTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTACTTACGTACCTGC 400
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACT 129
||| | | ||| |||||||||| | || |||| || ||||
Sbjct 401 GCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTGCCTTTACACT 445
>seq141
Length=26944
Score = 84.2 bits (92), Expect = 2e-14
Identities = 83/106 (78%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 25 TTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTGC 84
||||||||||||| |||||| |||||||||||||||||| | ||| ||| || ||||||
Sbjct 2318 TTGAGCGATGGCCTATCCATTTAGAACCACCGGATCACTAAGCCCTACTTACGTACCTGC 2259
Query 85 TCGAGCCGTCACTCTCGCAGTCAAGCCAG-CTTATGCCATTGCACT 129
||| | | ||| |||||||||| | || |||| || ||||
Sbjct 2258 GCGACTTATAAGTCTAGCAGTCAAGCATGTTTTTTGCCTTTACACT 2213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473596173608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |