Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq798 576 4e-162
seq658 538 1e-150
seq759 295 2e-77
seq702 194 5e-47
seq791 178 4e-42
>seq798
Length=516
Score = 576 bits (638), Expect = 4e-162
Identities = 390/431 (90%), Gaps = 7/431 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 89 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 148
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 149 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 208
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||| ||||||||||| |||| || ||| || || |||| |||||||||||||
Sbjct 209 AGCCCGTAAAGGACCTTAAAGCCAAAAGGTGGGACGTTAATCCCAGCTCCGCTTCATTGA 268
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTC-ACTTGCGCCGAAACGGCTCCCACTT 245
|||||||||||||||| |||||||||||||| || |||||||| ||||||||||
Sbjct 269 ATAAGTAAAAAAACGATGGAGGTAGTGGTATTTCAACCGGCGCCGAA---GCTCCCACTT 325
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGA-GTCAAGCTCAAC-AGGGTC 303
|||||||||| || ||| |||||||| ||| |||||| |||||||||||| ||||||
Sbjct 326 ATTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGATGTCAAGCTCAACAAGGGTC 385
Query 304 TTCTTTCCCCGCTGA-TTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 386 TTCTTTCCCCGCTGACTTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 445
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 446 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 505
Query 423 CATTTGGCTAC 433
|||||||||||
Sbjct 506 CATTTGGCTAC 516
>seq658
Length=762
Score = 538 bits (596), Expect = 1e-150
Identities = 322/337 (96%), Gaps = 3/337 (1%)
Strand=Plus/Minus
Query 207 GGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCAT 266
|||||||||||||||| |||||||| |||||||||||||||||||| || ||| |
Sbjct 761 GGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTCTACACCCTCCATGTCTT 705
Query 267 TTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 704 TTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCA 645
Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 585
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 584 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 525
Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 524 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 465
Query 507 CTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||| |||||||||
Sbjct 464 CTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 428
>seq759
Length=560
Score = 295 bits (326), Expect = 2e-77
Identities = 165/166 (99%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 375 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACC 60
Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 120
Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTT 540
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 121 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTT 166
>seq702
Length=668
Score = 194 bits (214), Expect = 5e-47
Identities = 115/120 (96%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 61
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 60 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1
>seq791
Length=524
Score = 178 bits (196), Expect = 4e-42
Identities = 124/136 (91%), Gaps = 4/136 (3%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTA-T 65
|||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 133 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGT-CCCCTTAGGACACCTGCGTTACT 75
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
|||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||
Sbjct 74 CTTTTAACAGATGTGCCG-CCCAGCCAAACT-CCCACCTGACAATGTCTTCAACCCGGAT 17
Query 126 CGGCCCGCGAAGGACC 141
| ||||| |||||||
Sbjct 16 CAGCCCGTAAAGGACC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635186362432
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |