Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq785 145 1e-32
seq702 145 1e-32
seq631 145 1e-32
seq195 129 1e-27
>seq785
Length=531
Score = 145 bits (160), Expect = 1e-32
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| |
Sbjct 310 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 367
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 368 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 427
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173
||| | |||| | ||| |||||| |||| | | ||||| ||||||||
Sbjct 428 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 481
>seq702
Length=668
Score = 145 bits (160), Expect = 1e-32
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| |
Sbjct 447 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 504
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 505 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 564
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173
||| | |||| | ||| |||||| |||| | | ||||| ||||||||
Sbjct 565 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 618
>seq631
Length=804
Score = 145 bits (160), Expect = 1e-32
Identities = 141/175 (81%), Gaps = 5/175 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| |
Sbjct 159 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 216
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 217 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 276
Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173
||| | |||| | ||| |||||| |||| | | ||||| ||||||||
Sbjct 277 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 330
>seq195
Length=18362
Score = 129 bits (142), Expect = 1e-27
Identities = 104/123 (85%), Gaps = 2/123 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | | |||| ||||| || |||||| |||||||| | |||| |
Sbjct 13054 GTACGAGAGGAACTGCTCA-TCCAGA-TAATTCGTATTTGCGCCTGTCTGATCGGGCAAT 13111
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| |||| ||| ||||||||||||||||||||| ||||||||| |||||
Sbjct 13112 GGCGCGAAGCTATCATCCGCTAGATTATGGCTGAACGCCTCTACGTCAGAATCTGTGCCA 13171
Query 121 GAA 123
|||
Sbjct 13172 GAA 13174
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819193381376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |