Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq785 145 1e-32 seq702 145 1e-32 seq631 145 1e-32 seq195 129 1e-27 >seq785 Length=531 Score = 145 bits (160), Expect = 1e-32 Identities = 141/175 (81%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| | Sbjct 310 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 367 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 368 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 427 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| |||||| |||| | | ||||| |||||||| Sbjct 428 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 481 >seq702 Length=668 Score = 145 bits (160), Expect = 1e-32 Identities = 141/175 (81%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| | Sbjct 447 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 504 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 505 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 564 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| |||||| |||| | | ||||| |||||||| Sbjct 565 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 618 >seq631 Length=804 Score = 145 bits (160), Expect = 1e-32 Identities = 141/175 (81%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| |||||||| |||||| ||||| || | |||| | Sbjct 159 GTACGAGAGGAACTGCTCA-TTCAGA-TAATTGGTATTTGCGCCTGTCCGATCGGGCAAT 216 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 217 GGCGCGAAGCTATCATCTGCTAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTGCCA 276 Query 121 GAACGGGGTGAT-TCTCTCCTGCACATCGTAGTCGGATACGAATAG-GCTTCGGC 173 ||| | |||| | ||| |||||| |||| | | ||||| |||||||| Sbjct 277 GAA-ACGATGATGTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGAGCTTCGGC 330 >seq195 Length=18362 Score = 129 bits (142), Expect = 1e-27 Identities = 104/123 (85%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | | |||| ||||| || |||||| |||||||| | |||| | Sbjct 13054 GTACGAGAGGAACTGCTCA-TCCAGA-TAATTCGTATTTGCGCCTGTCTGATCGGGCAAT 13111 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| |||| ||| ||||||||||||||||||||| ||||||||| ||||| Sbjct 13112 GGCGCGAAGCTATCATCCGCTAGATTATGGCTGAACGCCTCTACGTCAGAATCTGTGCCA 13171 Query 121 GAA 123 ||| Sbjct 13172 GAA 13174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193381376