Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555
.1_202015-11-17] 834 sequences; 24,807,186 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq740 618 1e-174
seq760 237 5e-60
seq14 111 5e-22
>seq740
Length=598
Score = 618 bits (684), Expect = 1e-174
Identities = 407/445 (91%), Gaps = 5/445 (1%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| ||||||||||| | |||||| || ||||||||||||||||||
Sbjct 446 GTACTCATTCCAATTGCAAGACCCAAAGG-GCCCTGCATTGTTATTTATTGTCACTACCT 388
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 387 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 328
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 327 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGCCACCATGGTA 268
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||
Sbjct 267 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCC-GCA 209
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| ||||||| ||||||||||||| || | | |||||
Sbjct 208 CAAGGCCATGCGATTCGAGAAGTTATCATGAATCACCAAGAAGGGCTTTCACCCATTGGT 149
Query 301 TTTTTATCTAATAAATACACCCCTT--CCGAAGTCGGGG-TTTTTAGCATGTATTAGCTC 357
||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||
Sbjct 148 TTTTTATCTAATAAATACACCCCTTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTC 89
Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417
|||||||||||| ||||||||||||| ||||||| ||||||||||| |||||||||||||
Sbjct 88 TAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAACTGATTTAA 29
Query 418 TGAGCCATTCGCAGTTTCACTGTAT 442
|||||||||||||||||||| ||||
Sbjct 28 TGAGCCATTCGCAGTTTCACAGTAT 4
>seq760
Length=556
Score = 237 bits (262), Expect = 5e-60
Identities = 147/156 (94%), Gaps = 1/156 (1%)
Strand=Plus/Minus
Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409
|||||||||||||||||||| ||||||||||||| ||||||| ||||||||||| |||||
Sbjct 556 ATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGGTACCATCAAATAAACTATAAC 497
Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATG 468
|||||||||||||||||||||||||||| |||| | ||| |||||||||||||||||||
Sbjct 496 TGATTTAATGAGCCATTCGCAGTTTCACAGTATGAATTTGTTTATACTTAGACATGCATG 437
Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||
Sbjct 436 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 401
>seq14
Length=72078
Score = 111 bits (122), Expect = 5e-22
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||| ||||||||||| | |||||| || ||||||||||||||||||
Sbjct 259 GTACTCATTCCAATTGCAAGACCCAAAGG-GCCCTGCATTGTTATTTATTGTCACTACCT 317
Query 61 CCCCGTGTCGGGATTGGGTAA 81
|||||||||||||||||||||
Sbjct 318 CCCCGTGTCGGGATTGGGTAA 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510387403264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |