Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20albidus_20var._20albidus_20[genbank_20GCA_5F001444555 .1_202015-11-17] 834 sequences; 24,807,186 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq223 165 6e-36 >seq223 Length=304017 Score = 165 bits (182), Expect = 6e-36 Identities = 543/851 (64%), Gaps = 61/851 (7%) Strand=Plus/Minus Query 66128 GCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGC 66187 ||||||||||| | |||| | || ||||| || ||||||| || | ||||||| | Sbjct 175926 GCATCCTTGTAGAGCATGAATGGTCCACCGGTTTCGACTTGGGCATCCAAGATGGCGAAC 175867 Query 66188 CAAAGAGCGCGTGCCTTCACCGTACGTACCG-CCCTACCTTTGCGTTCGTAATGTTCGTA 66246 ||||| ||||||| | || | | | | | | |||| ||||| || | |||||| Sbjct 175866 CAAAGCTTTTGTGCCTTGA-CGACCTTTCTGAACTTGCCTTCACGTTCATACTTTTCGTA 175808 Query 66247 GAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACAT 66306 || | ||||| | | || || ||||||| | || |||| || |||||||| Sbjct 175807 CAGTTCGTCGAAAGCCTTGCCGTGAACGTCGGACAATCCGGGGCACTCGTTGGGACACAT 175748 Query 66307 CAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGC 66366 || || ||| || ||||| |||||||| |||||||| | || || |||||||| || Sbjct 175747 CAACGCCCAGTCTCCATCGGACTCTACACGTCGCATAAACATGTCCGGAATCCAGAGCGC 175688 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAA 66426 |||||| | || || ||||| || || ||||||| || || |||||||||| ||| Sbjct 175687 GTAGAACAAGTCTCGAGCTCGGACTTCTTCCTTGCCGTGGTTCTTTCGCAAGTCGATGAA 175628 Query 66427 CTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATG---------------------GC 66465 || |||| || || ||||| ||||| ||||||||| | Sbjct 175627 ATCGAAGACATCCGCGTGCCAAGGTTCGAGGTAGATGCTATAGAAGAAGGGTCAGACTGA 175568 Query 66466 GAACGAGC----------------CCATA----------------CGTTTGCCGCCACCT 66493 ||| |||| |||| || ||| || || Sbjct 175567 GAATGAGCAAGGAGGAAAAGGGAGACATACGCAAAGGCACCAGGTCGCTTGTTACCGCCC 175508 Query 66494 TGGTCGACGTAGCGAGCG---ACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550 || |||||||| |||||| ||| || ||| | || | ||| || |||| ||||| Sbjct 175507 TGATCGACGTATCGAGCGGTAGCATCGT--AAG-CTCGAAGCATGGGGACGATACCGTTC 175451 Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610 || | || ||||| ||| | ||| ||||| || || || | ||||| |||| Sbjct 175450 GAGTAACCGTTGGTACCGGCAATGTACGATCCCTTGGCTCGAATGTTGTGAATGTTCAAT 175391 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCG 66670 |||||||| || || ||||| || || |||||| || || | | || || Sbjct 175390 CCAATACCGCCCGCAGTCTTGGAAATCATGGCACAAGTCTTCAAGGTATCGTAGATTCCC 175331 Query 66671 TCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTG 66730 ||||| ||||| |||| |||| | | | |||| || | ||||| | ||| || Sbjct 175330 TCAATCGAGTCGTCCTTCATGGCGACCAAGAAGCACGAGGACAACTGGGGGTGGGGAGTA 175271 Query 66731 GCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTAC 66790 |||| ||| | |||||| | ||||| || ||||| | |||||| |||||| Sbjct 175270 CCGGCGTTGAACAAGGTGGGCGAGGCGTGGGTGAAGTATCGCTCGGACATGAGGTTGTAC 175211 Query 66791 GTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGG 66850 ||||||||||| || | || | ||| || || |||| || |||||| | | Sbjct 175210 GTCTCGATGACTTTCTCGACGTCTCGGCCGTGGATACCGACAGCGACTCGCATAATCATA 175151 Query 66851 TATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTC 66910 | ||||| |||||| | | || | | ||| | | ||||| || || || |||||| Sbjct 175150 TGCTGAGGTCGTTCGGCGATCCTGCCGTCGATTCGGAGCAAGTATGATCGCTCTAGGGTC 175091 Query 66911 TTGATACCAAA 66921 |||| ||| || Sbjct 175090 TTGAAACCGAA 175080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397563958969760