Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq37 284 2e-74 seq490 221 2e-55 seq641 127 3e-27 >seq37 Length=8170 Score = 284 bits (314), Expect = 2e-74 Identities = 209/238 (88%), Gaps = 4/238 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| | Sbjct 6380 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 6437 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| |||||| Sbjct 6438 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACTGAGTTTCACAAGATT 6497 Query 120 ACCCGGACCTGTCGGCCAAGGTGATA-GACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||| | ||| |||||||||| | || |||||| || | |||||||||||||||||| Sbjct 6498 ACCCAGGCCTCTCGGCCAAGGCGGTAAGACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGC 6557 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 6558 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGACTA 6615 >seq490 Length=264 Score = 221 bits (244), Expect = 2e-55 Identities = 183/218 (84%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 12 AGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGA 71 || |||||| |||||||||||| | ||||| ||||||||||| ||| |||||||||||| Sbjct 216 AGAGACGTAATCAACGCGAGCTGGC-GACTCACGCTTACTAGGTATT-CCTCGTTGAAGA 159 Query 72 CCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATTACCCGGACCTG 130 |||| |||||||||| |||||||||| ||||| | ||||| |||||||||| ||| Sbjct 158 CCAATAATTGCAATGCTCTATCCCCAGCACGACTTAGTTTCACAAGATTACCCAAGCCTC 99 Query 131 TCGGCCAAGGTGATA-GACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 ||||| |||| | || |||||| || | |||||||| ||||||||||||||||||| Sbjct 98 TCGGCAAAGGCGGTAAGACTCGCTGGCTCAGACAGTGTAGAGCGCGTGCGGCCCAGAACA 39 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTC 227 || ||||||| |||||||||| |||||||||||||||| Sbjct 38 TCGAAGGGCAACACAGACCTGGTATTGCCTCAAACTTC 1 >seq641 Length=827 Score = 127 bits (140), Expect = 3e-27 Identities = 113/139 (81%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 94 CCCATCACGATGAAATTTCA-AAGATTACCCGGACCTGTCGGCCAAGGTGATAG-ACTCG 151 |||| ||||| | | ||||| ||| || ||| | || |||||| ||| | || |||| Sbjct 775 CCCAGCACGACGGAGTTTCACAAGGTTGCCCAGGCCGCTCGGCCGAGGCGGTAATACTCC 716 Query 152 TTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGT 211 || | |||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct 715 CTGGCTCAGTCAGTGTAGCGCGCTTGCGGCCCAGAACATCTAAGGGTATCACAGACCTGG 656 Query 212 TATTGCCTCAAACTTCCGT 230 ||||||||||||||||||| Sbjct 655 TATTGCCTCAAACTTCCGT 637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751994324985