Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20gattii_20VGI_20[genbank_20GCA_5F000786445.1_202014- 10-24] 779 sequences; 17,256,624 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq37 86.0 3e-15 seq542 71.6 6e-11 >seq37 Length=8170 Score = 86.0 bits (94), Expect = 3e-15 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| || Sbjct 5689 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACCGGGAAGAGCTCA 5633 >seq542 Length=254 Score = 71.6 bits (78), Expect = 6e-11 Identities = 47/52 (90%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 6 AGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 |||||||||| |||||||||| ||||||||||||||||| | ||||||| || Sbjct 140 AGAAACTAACAAGGATTCCCTTAGTAACGGCGAGTGAACTGTGAAGAGCTCA 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230398317360