Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
45.1_202017-07-07] 841 sequences; 18,436,157 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq161 686 0.0
seq116 194 5e-47
seq113 187 8e-45
>seq161
Length=7192
Score = 686 bits (760), Expect = 0.0
Identities = 437/474 (92%), Gaps = 3/474 (1%)
Strand=Plus/Minus
Query 70 TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGC 129
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 7192 TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCGGC 7133
Query 130 CCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTA 189
| | || ||||||||||| |||| ||| | | |||| ||||||||||||| ||
Sbjct 7132 CGGTAAACGACCTTAACGCTAGAAGGTGGGACTTTCATCCCAGCTCCGCTTCATTGAATA 7073
Query 190 AGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTC 249
|||||||||||||| |||||||||||||||| |||||||| ||||||||||||||
Sbjct 7072 AGTAAAAAAACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTATTC 7016
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
|||||| || ||| |||||||| ||| ||||||||||||||||||||||||||||||
Sbjct 7015 TACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTT 6956
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6955 CCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 6896
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6895 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 6836
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6835 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 6776
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 6775 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTTTCTG 6722
>seq116
Length=16932
Score = 194 bits (214), Expect = 5e-47
Identities = 116/122 (95%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| || || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15854 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 15795
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 15794 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 15735
Query 127 GG 128
||
Sbjct 15734 GG 15733
>seq113
Length=178146
Score = 187 bits (206), Expect = 8e-45
Identities = 108/111 (97%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 57659 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATCTTTTAACAGATGT 57600
Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCC 130
|||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 57599 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATCGGCC 57549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635186247968
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |