Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 45.1_202017-07-07] 841 sequences; 18,436,157 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq116 125 1e-26 >seq116 Length=16932 Score = 125 bits (138), Expect = 1e-26 Identities = 142/185 (77%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | ||| | ||||||||| |||||| ||||| || | |||| | Sbjct 16179 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGTCTGTCCGATCGGGCAAT 16236 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| ||| || ||||||||||||||||||||||||||||||| | | | Sbjct 16237 GACGCGAAGCTATCATACGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 16296 Query 121 GAACGGGGTGATTCT-CTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | |||| | ||| |||||| |||| | | ||||||||||||| ||| Sbjct 16297 GAA-ACGACGATTTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGGCTTCGGCTGTGAA 16355 Query 180 CCTTA 184 || || Sbjct 16356 CCATA 16360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819193325824