Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157
55.1_202017-07-07] 669 sequences; 18,368,897 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq122 468 9e-130
seq39 84.2 4e-14
>seq122
Length=16844
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 762 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 821
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 881
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 882 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 941
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 942 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1001
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1002 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1047
>seq39
Length=47892
Score = 84.2 bits (92), Expect = 4e-14
Identities = 55/60 (92%), Gaps = 2/60 (3%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCC--TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
|||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 17786 GCTCGCGTTCCCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 17845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394284064
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |