Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022157 55.1_202017-07-07] 669 sequences; 18,368,897 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq163 421 1e-115 >seq163 Length=7186 Score = 421 bits (466), Expect = 1e-115 Identities = 283/312 (91%), Gaps = 3/312 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78 || ||||||||||||||||||||||| |||||| |||||||| ||||| | ||||||| Sbjct 3601 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 3660 Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137 |||||||| ||||| || || ||| ||||||||||||||||||||||||||||||||||| Sbjct 3661 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 3720 Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196 |||||||||||||||||||||||||||||||||| |||||| ||||| | | | |||||| Sbjct 3721 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 3780 Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256 ||| ||| |||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct 3781 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 3840 Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316 ||||||||||||||||||| ||||||||||| | |||| |||| |||||||||||||||| Sbjct 3841 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 3900 Query 317 CTGCCCTTTGTA 328 |||||||||||| Sbjct 3901 CTGCCCTTTGTA 3912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947193663232