Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022167 25.1_202017-07-12] 15 sequences; 18,914,647 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq2 778 0.0 >seq2 Length=1621676 Score = 778 bits (862), Expect = 0.0 Identities = 495/537 (92%), Gaps = 3/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 273438 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 273497 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 273498 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 273557 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | || ||||||||||| |||| ||| | | |||| ||||||||||||| Sbjct 273558 GGCCGGTAAACGACCTTAACGCTAGAAGGTGGGACTTTCATCCCAGCTCCGCTTCATTGA 273617 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 273618 ATAAGTAAAAAAACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 273674 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 273675 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 273734 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 273735 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 273794 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 273795 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 273854 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 273855 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 273914 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 273915 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTTTCTG 273971 Score = 778 bits (862), Expect = 0.0 Identities = 495/537 (92%), Gaps = 3/537 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 281713 CTTTTGTTCCACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATC 281772 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 281773 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 281832 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | || ||||||||||| |||| ||| | | |||| ||||||||||||| Sbjct 281833 GGCCGGTAAACGACCTTAACGCTAGAAGGTGGGACTTTCATCCCAGCTCCGCTTCATTGA 281892 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct 281893 ATAAGTAAAAAAACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACTTA 281949 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||| || ||| |||||||| ||| ||||||||||||||||||||||||||| Sbjct 281950 TTCTACACCCTCCATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTC 282009 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 282010 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 282069 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282070 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 282129 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 282130 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 282189 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 ||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 282190 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCATTTTCTG 282246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199754720