Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022167 25.1_202017-07-12] 15 sequences; 18,914,647 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2 125 1e-26 >seq2 Length=1621676 Score = 125 bits (138), Expect = 1e-26 Identities = 142/185 (77%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | ||| | ||||||||| |||||| ||||| || | |||| | Sbjct 273113 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGTCTGTCCGATCGGGCAAT 273056 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| ||| || ||||||||||||||||||||||||||||||| | | | Sbjct 273055 GACGCGAAGCTATCATACGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 272996 Query 121 GAACGGGGTGATTCT-CTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | |||| | ||| |||||| |||| | | ||||||||||||| ||| Sbjct 272995 GAA-ACGACGATTTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGGCTTCGGCTGTGAA 272937 Query 180 CCTTA 184 || || Sbjct 272936 CCATA 272932 Score = 125 bits (138), Expect = 1e-26 Identities = 142/185 (77%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | ||| | ||||||||| |||||| ||||| || | |||| | Sbjct 281388 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGTCTGTCCGATCGGGCAAT 281331 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | |||||||||| ||| || ||||||||||||||||||||||||||||||| | | | Sbjct 281330 GACGCGAAGCTATCATACGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 281271 Query 121 GAACGGGGTGATTCT-CTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 ||| | |||| | ||| |||||| |||| | | ||||||||||||| ||| Sbjct 281270 GAA-ACGACGATTTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGGCTTCGGCTGTGAA 281212 Query 180 CCTTA 184 || || Sbjct 281211 CCATA 281207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199880960