Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq490 354 1e-95 seq501 77.0 6e-12 >seq490 Length=3042 Score = 354 bits (392), Expect = 1e-95 Identities = 265/308 (86%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| ||||| Sbjct 1638 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 1579 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 | |||||| ||||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct 1578 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 1519 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1518 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 1459 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| | Sbjct 1458 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 1399 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||| ||||||||||| || ||||||| ||||||||| |||| ||||||| Sbjct 1398 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 1340 Query 311 GTTAGGGG 318 |||||||| Sbjct 1339 GTTAGGGG 1332 >seq501 Length=1881 Score = 77.0 bits (84), Expect = 6e-12 Identities = 65/79 (82%), Gaps = 1/79 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| ||||| Sbjct 79 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 20 Query 71 ACTTTTACTTTGAAAAAAT 89 | |||||| |||||||||| Sbjct 19 AATTTTACCTTGAAAAAAT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915194829120