Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq520 468 9e-130 seq457 468 9e-130 seq519 459 5e-127 seq446 459 5e-127 seq523 291 1e-76 seq524 275 1e-71 seq412 91.5 3e-16 >seq520 Length=2390 Score = 468 bits (518), Expect = 9e-130 Identities = 276/286 (97%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1536 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1595 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1596 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1655 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1656 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1715 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1716 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1775 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1776 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1821 >seq457 Length=1560 Score = 468 bits (518), Expect = 9e-130 Identities = 276/286 (97%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 706 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 765 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 766 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 825 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 826 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 885 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 886 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 945 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 946 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 991 >seq519 Length=2629 Score = 459 bits (508), Expect = 5e-127 Identities = 274/286 (96%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| ||||| || Sbjct 1702 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGGCT 1761 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1762 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1821 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1822 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1881 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1882 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1941 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1942 AGGGACTAAAGGATCGATAGGCCACAGTTTCATGGTTTGTATTCAC 1987 >seq446 Length=2458 Score = 459 bits (508), Expect = 5e-127 Identities = 274/286 (96%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| ||||| || Sbjct 749 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGGCT 808 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 809 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 868 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 869 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 928 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 929 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 988 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 989 AGGGACTAAAGGATCGATAGGCCACAGTTTCATGGTTTGTATTCAC 1034 >seq523 Length=1452 Score = 291 bits (322), Expect = 1e-76 Identities = 178/188 (95%), Gaps = 1/188 (1%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1265 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1324 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1325 AAACCCAGCTCCCGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1384 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1385 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAAGCTTG 1444 Query 190 GCTGCCAC 197 |||||||| Sbjct 1445 GCTGCCAC 1452 >seq524 Length=1336 Score = 275 bits (304), Expect = 1e-71 Identities = 166/174 (95%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1163 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1222 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1223 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1282 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1283 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 1336 >seq412 Length=182512 Score = 91.5 bits (100), Expect = 3e-16 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 18705 GCTCACGTTCCCTATTAAGGGGTGAGCAATCCAACGCTTACCGAATTCTGCTTCGGTA 18762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395172640