Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175
45.1_202017-07-13] 565 sequences; 18,083,839 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq520 468 9e-130
seq457 468 9e-130
seq519 459 5e-127
seq446 459 5e-127
seq523 291 1e-76
seq524 275 1e-71
seq412 91.5 3e-16
>seq520
Length=2390
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1536 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1595
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1596 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1655
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1656 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1715
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1716 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1775
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1776 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1821
>seq457
Length=1560
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 706 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 765
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 766 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 825
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 826 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 885
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 886 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 945
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 946 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 991
>seq519
Length=2629
Score = 459 bits (508), Expect = 5e-127
Identities = 274/286 (96%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||| ||
Sbjct 1702 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGGCT 1761
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1762 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1821
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1822 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1881
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1882 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1941
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1942 AGGGACTAAAGGATCGATAGGCCACAGTTTCATGGTTTGTATTCAC 1987
>seq446
Length=2458
Score = 459 bits (508), Expect = 5e-127
Identities = 274/286 (96%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||| ||
Sbjct 749 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGGCT 808
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 868
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 928
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 929 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 988
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 989 AGGGACTAAAGGATCGATAGGCCACAGTTTCATGGTTTGTATTCAC 1034
>seq523
Length=1452
Score = 291 bits (322), Expect = 1e-76
Identities = 178/188 (95%), Gaps = 1/188 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1265 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1324
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 AAACCCAGCTCCCGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1384
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1385 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAAAGCTTG 1444
Query 190 GCTGCCAC 197
||||||||
Sbjct 1445 GCTGCCAC 1452
>seq524
Length=1336
Score = 275 bits (304), Expect = 1e-71
Identities = 166/174 (95%), Gaps = 1/174 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1163 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1222
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1223 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1282
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1283 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAA 1336
>seq412
Length=182512
Score = 91.5 bits (100), Expect = 3e-16
Identities = 55/58 (95%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 18705 GCTCACGTTCCCTATTAAGGGGTGAGCAATCCAACGCTTACCGAATTCTGCTTCGGTA 18762
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854395172640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |