Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175 45.1_202017-07-13] 565 sequences; 18,083,839 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq490 205 1e-50 seq501 77.0 4e-12 >seq490 Length=3042 Score = 205 bits (226), Expect = 1e-50 Identities = 162/192 (84%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1474 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1533 Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125 |||| |||||||||||||||||||||||| ||||||||||| |||||||||| | ||| Sbjct 1534 GGCGATTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCA 1593 Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183 || ||| | ||| |||||| || ||||| |||||| || | || |||| | | || Sbjct 1594 CACCCAGTAAAGAGCATACAGGACCACCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCC 1653 Query 184 GTGAGGCGGACC 195 |||||| ||||| Sbjct 1654 GTGAGGAGGACC 1665 >seq501 Length=1881 Score = 77.0 bits (84), Expect = 4e-12 Identities = 82/106 (77%), Gaps = 2/106 (2%) Strand=Plus/Plus Query 92 ATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAAG-GCATACGGGCTCA 149 ||||| ||||||||||| |||||||||| | ||||| ||| | ||| |||||| || || Sbjct 1 ATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCACACCCAGTAAAGAGCATACAGGACCA 60 Query 150 CCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195 ||| |||||| || | || |||| | | |||||||| ||||| Sbjct 61 CCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCCGTGAGGAGGACC 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595196742210