Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022175
45.1_202017-07-13] 565 sequences; 18,083,839 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq490 205 1e-50
seq501 77.0 4e-12
>seq490
Length=3042
Score = 205 bits (226), Expect = 1e-50
Identities = 162/192 (84%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1474 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1533
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|||| |||||||||||||||||||||||| ||||||||||| |||||||||| | |||
Sbjct 1534 GGCGATTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCA 1593
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| | ||| |||||| || ||||| |||||| || | || |||| | | ||
Sbjct 1594 CACCCAGTAAAGAGCATACAGGACCACCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCC 1653
Query 184 GTGAGGCGGACC 195
|||||| |||||
Sbjct 1654 GTGAGGAGGACC 1665
>seq501
Length=1881
Score = 77.0 bits (84), Expect = 4e-12
Identities = 82/106 (77%), Gaps = 2/106 (2%)
Strand=Plus/Plus
Query 92 ATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCACA-CCAATGAAG-GCATACGGGCTCA 149
||||| ||||||||||| |||||||||| | ||||| ||| | ||| |||||| || ||
Sbjct 1 ATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCACACCCAGTAAAGAGCATACAGGACCA 60
Query 150 CCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCCGTGAGGCGGACC 195
||| |||||| || | || |||| | | |||||||| |||||
Sbjct 61 CCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCCGTGAGGAGGACC 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196742210
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |