Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200 45.1_202017-07-17] 898 sequences; 18,619,184 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq30 354 1e-95 >seq30 Length=5756 Score = 354 bits (392), Expect = 1e-95 Identities = 265/308 (86%), Gaps = 2/308 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| ||||| Sbjct 2560 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 2501 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 | |||||| ||||||||||||||||||||||||||||| | || ||||||||||||||| Sbjct 2500 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 2441 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2440 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 2381 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| | Sbjct 2380 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 2321 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 |||||| ||| ||||||||||| || ||||||| ||||||||| |||| ||||||| Sbjct 2320 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 2262 Query 311 GTTAGGGG 318 |||||||| Sbjct 2261 GTTAGGGG 2254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915191781504