Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq30 421 1e-115
>seq30
Length=5756
Score = 421 bits (466), Expect = 1e-115
Identities = 283/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78
|| ||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||
Sbjct 1918 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 1859
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct 1858 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 1799
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
|||||||||||||||||||||||||||||||||| |||||| ||||| | | | ||||||
Sbjct 1798 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 1739
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 1738 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 1679
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||
Sbjct 1678 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 1619
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 1618 CTGCCCTTTGTA 1607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947191494144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |