Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022200
45.1_202017-07-17] 898 sequences; 18,619,184 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq30 760 0.0
>seq30
Length=5756
Score = 760 bits (842), Expect = 0.0
Identities = 475/507 (94%), Gaps = 3/507 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 2723 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 2782
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2783 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2842
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2843 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 2902
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2903 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 2962
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||| |||||| ||| ||||| | |||||
Sbjct 2963 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 3022
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||
Sbjct 3023 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCT 3082
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||
Sbjct 3083 AGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAAT 3142
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477
||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||
Sbjct 3143 GAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCT 3202
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 3203 TTGAGACAAGCATATGACTACTGGCAG 3229
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510386436608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |