Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
25.1_202017-07-20] 568 sequences; 18,568,655 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq527 354 1e-95
seq526 354 1e-95
>seq527
Length=2726
Score = 354 bits (392), Expect = 1e-95
Identities = 265/308 (86%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70
|| || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| |||||
Sbjct 1101 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 1042
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
| |||||| ||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 1041 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 982
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 981 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 922
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| |
Sbjct 921 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 862
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||||| ||| ||||||||||| || ||||||| ||||||||| |||| |||||||
Sbjct 861 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 803
Query 311 GTTAGGGG 318
||||||||
Sbjct 802 GTTAGGGG 795
>seq526
Length=1907
Score = 354 bits (392), Expect = 1e-95
Identities = 265/308 (86%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70
|| || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| |||||
Sbjct 1427 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 1368
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
| |||||| ||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 1367 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 1308
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1307 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 1248
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| |
Sbjct 1247 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 1188
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||||| ||| ||||||||||| || ||||||| ||||||||| |||| |||||||
Sbjct 1187 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 1129
Query 311 GTTAGGGG 318
||||||||
Sbjct 1128 GTTAGGGG 1121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194801664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |