Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
25.1_202017-07-20] 568 sequences; 18,568,655 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq527 367 2e-99
seq526 367 2e-99
>seq527
Length=2726
Score = 367 bits (406), Expect = 2e-99
Identities = 237/258 (92%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 293 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 352
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || || ||| | ||||||||||||||| || |
Sbjct 353 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGTCATAC 412
Query 122 -ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|||| ||| || || | |||||||||||||||||||||||||||||||||||||||
Sbjct 413 GACCAGCCAAAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 472
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 473 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 532
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 533 AAGAGCTATCAATCTGTC 550
>seq526
Length=1907
Score = 367 bits (406), Expect = 2e-99
Identities = 237/258 (92%), Gaps = 1/258 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 619 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 678
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||| | | || || ||| | ||||||||||||||| || |
Sbjct 679 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGTCATAC 738
Query 122 -ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|||| ||| || || | |||||||||||||||||||||||||||||||||||||||
Sbjct 739 GACCAGCCAAAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 798
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 799 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 858
Query 241 AAGAGCTATCAATCTGTC 258
||||||||||||||||||
Sbjct 859 AAGAGCTATCAATCTGTC 876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796795615608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |