Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
25.1_202017-07-20] 568 sequences; 18,568,655 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq522 468 9e-130
seq528 210 4e-52
seq512 210 4e-52
seq523 109 9e-22
seq434 96.9 6e-18
>seq522
Length=1369
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 102 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 161
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 162 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 221
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 222 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 281
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 282 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 341
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 387
>seq528
Length=2093
Score = 210 bits (232), Expect = 4e-52
Identities = 130/138 (94%), Gaps = 1/138 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1956 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 2015
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2016 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 2075
Query 130 CGGTATGATAGGAAGAGC 147
||||||||||||||||||
Sbjct 2076 CGGTATGATAGGAAGAGC 2093
>seq512
Length=1160
Score = 210 bits (232), Expect = 4e-52
Identities = 130/138 (94%), Gaps = 1/138 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1023 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1082
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1083 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1142
Query 130 CGGTATGATAGGAAGAGC 147
||||||||||||||||||
Sbjct 1143 CGGTATGATAGGAAGAGC 1160
>seq523
Length=1538
Score = 109 bits (120), Expect = 9e-22
Identities = 63/65 (97%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 231 CCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 290
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 CCTCTAGCCTCAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 60
Query 291 TTCAC 295
|||||
Sbjct 61 TTCAC 65
>seq434
Length=34443
Score = 96.9 bits (106), Expect = 6e-18
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 4164 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 4221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854395147008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |