Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 25.1_202017-07-20] 568 sequences; 18,568,655 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq522 468 9e-130 seq528 210 4e-52 seq512 210 4e-52 seq523 109 9e-22 seq434 96.9 6e-18 >seq522 Length=1369 Score = 468 bits (518), Expect = 9e-130 Identities = 276/286 (97%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 102 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 161 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 162 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 221 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 222 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 281 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 282 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 341 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 342 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 387 >seq528 Length=2093 Score = 210 bits (232), Expect = 4e-52 Identities = 130/138 (94%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1956 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 2015 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2016 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 2075 Query 130 CGGTATGATAGGAAGAGC 147 |||||||||||||||||| Sbjct 2076 CGGTATGATAGGAAGAGC 2093 >seq512 Length=1160 Score = 210 bits (232), Expect = 4e-52 Identities = 130/138 (94%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1023 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1082 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1083 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1142 Query 130 CGGTATGATAGGAAGAGC 147 |||||||||||||||||| Sbjct 1143 CGGTATGATAGGAAGAGC 1160 >seq523 Length=1538 Score = 109 bits (120), Expect = 9e-22 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 231 CCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 290 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 CCTCTAGCCTCAAACTCCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTA 60 Query 291 TTCAC 295 ||||| Sbjct 61 TTCAC 65 >seq434 Length=34443 Score = 96.9 bits (106), Expect = 6e-18 Identities = 56/58 (97%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 4164 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 4221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854395147008