Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
25.1_202017-07-20] 568 sequences; 18,568,655 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq527 118 6e-25
seq526 118 6e-25
>seq527
Length=2726
Score = 118 bits (130), Expect = 6e-25
Identities = 97/112 (87%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||||| | || | ||||||||||||||| || ||||||
Sbjct 74 CCGTT-GCCGGCTCCCCAACGCCAATCCGGAGA--TCTCACTAAGCCATT-CAATCGGTA 129
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||| ||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 130 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 179
>seq526
Length=1907
Score = 118 bits (130), Expect = 6e-25
Identities = 97/112 (87%), Gaps = 6/112 (5%)
Strand=Plus/Plus
Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72
||||| ||||| ||| ||| |||||| | || | ||||||||||||||| || ||||||
Sbjct 400 CCGTT-GCCGGCTCCCCAACGCCAATCCGGAGA--TCTCACTAAGCCATT-CAATCGGTA 455
Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124
||| ||||||||||| |||||||||||||||||||||||| |||||| ||||
Sbjct 456 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGCGAGCT 505
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300798398240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |