Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 25.1_202017-07-20] 568 sequences; 18,568,655 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq527 221 1e-55 seq526 221 1e-55 >seq527 Length=2726 Score = 221 bits (244), Expect = 1e-55 Identities = 162/187 (87%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||| ||||||||||||||| ||||||||||||| | || |||||| Sbjct 1050 GGAACCAGGAATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATA 991 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 990 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCG- 932 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| |||||||| | |||||| ||| | ||||||||||| Sbjct 931 CCGTAATGATTAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTC 872 Query 181 TTGGATT 187 || |||| Sbjct 871 TTAGATT 865 >seq526 Length=1907 Score = 221 bits (244), Expect = 1e-55 Identities = 162/187 (87%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||| ||||||||||||||| ||||||||||||| | || |||||| Sbjct 1376 GGAACCAGGAATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATA 1317 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1316 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCG- 1258 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| |||||||| | |||||| ||| | ||||||||||| Sbjct 1257 CCGTAATGATTAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTC 1198 Query 181 TTGGATT 187 || |||| Sbjct 1197 TTAGATT 1191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997182720