Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
25.1_202017-07-20] 568 sequences; 18,568,655 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq527 421 1e-115
seq526 421 1e-115
>seq527
Length=2726
Score = 421 bits (466), Expect = 1e-115
Identities = 283/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78
|| ||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||
Sbjct 459 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 400
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct 399 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 340
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
|||||||||||||||||||||||||||||||||| |||||| ||||| | | | ||||||
Sbjct 339 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 280
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 279 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 220
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||
Sbjct 219 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 160
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 159 CTGCCCTTTGTA 148
>seq526
Length=1907
Score = 421 bits (466), Expect = 1e-115
Identities = 283/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78
|| ||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||
Sbjct 785 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 726
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct 725 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 666
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
|||||||||||||||||||||||||||||||||| |||||| ||||| | | | ||||||
Sbjct 665 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 606
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 605 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 546
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||
Sbjct 545 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 486
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 485 CTGCCCTTTGTA 474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194619904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |