Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 95.1_202017-07-20] 588 sequences; 18,602,782 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq547 134 8e-30 seq546 134 8e-30 >seq547 Length=2605 Score = 134 bits (148), Expect = 8e-30 Identities = 102/118 (86%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCC 59 ||||||||||||||||||||||||||||||||||| | ||||| | ||| || | | | Sbjct 758 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGACCCAGTCAGA--GATTGACGTGGGC 815 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| || || Sbjct 816 CGATCCCTAGTCGGCATCGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTTGA 873 >seq546 Length=3663 Score = 134 bits (148), Expect = 8e-30 Identities = 102/118 (86%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATA-ACATCGCC 59 ||||||||||||||||||||||||||||||||||| | ||||| | ||| || | | | Sbjct 2521 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGACCCAGTCAGA--GATTGACGTGGGC 2578 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| || || Sbjct 2579 CGATCCCTAGTCGGCATCGTTTACTGTTAAGACTACAACGGTATCTAATCGTTTTTGA 2636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278398465320