Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
95.1_202017-07-20] 588 sequences; 18,602,782 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq547 354 1e-95
seq546 354 1e-95
>seq547
Length=2605
Score = 354 bits (392), Expect = 1e-95
Identities = 265/308 (86%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70
|| || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| |||||
Sbjct 1181 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 1122
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
| |||||| ||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 1121 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 1062
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1061 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 1002
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| |
Sbjct 1001 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 942
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||||| ||| ||||||||||| || ||||||| ||||||||| |||| |||||||
Sbjct 941 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 883
Query 311 GTTAGGGG 318
||||||||
Sbjct 882 GTTAGGGG 875
>seq546
Length=3663
Score = 354 bits (392), Expect = 1e-95
Identities = 265/308 (86%), Gaps = 2/308 (1%)
Strand=Plus/Minus
Query 12 GCCGGGCCTTTCCTTCTGGGGATCC-GCATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70
|| || |||| ||| |||| | ||| | |||| ||| ||||||||||| ||||| |||||
Sbjct 2944 GCTGGACCTTACCTCCTGGTGGTCCTGTATGCTCTTTACTGGGTGTGCAGGGGAACCAGG 2885
Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130
| |||||| ||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct 2884 AATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATACATTAGCAT 2825
Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2824 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCGCCGTAATGAT 2765
Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250
||||||||| |||||||| | |||||| ||| ||||||||||||||| |||| |
Sbjct 2764 TAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTCTTAGATTGAC 2705
Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
|||||| ||| ||||||||||| || ||||||| ||||||||| |||| |||||||
Sbjct 2704 GGAAGACCAACAACTGCGAAAGCATTTGCCAAGGACGTTTTCATTGATCA-AGAACGAAG 2646
Query 311 GTTAGGGG 318
||||||||
Sbjct 2645 GTTAGGGG 2638
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915194618624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |