Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 95.1_202017-07-20] 588 sequences; 18,602,782 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq547 367 2e-99 seq546 367 2e-99 >seq547 Length=2605 Score = 367 bits (406), Expect = 2e-99 Identities = 237/258 (92%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 373 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 432 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | || || ||| | ||||||||||||||| || | Sbjct 433 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGTCATAC 492 Query 122 -ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 |||| ||| || || | ||||||||||||||||||||||||||||||||||||||| Sbjct 493 GACCAGCCAAAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 552 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 553 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 612 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 613 AAGAGCTATCAATCTGTC 630 >seq546 Length=3663 Score = 367 bits (406), Expect = 2e-99 Identities = 237/258 (92%), Gaps = 1/258 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2136 ACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2195 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | || || ||| | ||||||||||||||| || | Sbjct 2196 CCTGTTATTGCCTCAAACTTCCGTCGACTAGACGCCGACAGTCCCTCTAAGAAGTCATAC 2255 Query 122 -ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 |||| ||| || || | ||||||||||||||||||||||||||||||||||||||| Sbjct 2256 GACCAGCCAAAGCCGGCCTGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 2315 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2316 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 2375 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 2376 AAGAGCTATCAATCTGTC 2393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796795461228