Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
95.1_202017-07-20] 588 sequences; 18,602,782 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq544 468 9e-130
seq548 109 9e-22
seq534 109 9e-22
seq468 96.9 6e-18
>seq544
Length=1448
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 455 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 514
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 515 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 574
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 575 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 634
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 635 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 694
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 695 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 740
>seq548
Length=1168
Score = 109 bits (120), Expect = 9e-22
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1087 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1146
Query 70 AAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||
Sbjct 1147 AAACCCAGCTCACGTTCCCTAT 1168
>seq534
Length=1105
Score = 109 bits (120), Expect = 9e-22
Identities = 74/82 (90%), Gaps = 1/82 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1024 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1083
Query 70 AAACCCAGCTCACGTTCCCTAT 91
||||||||||||||||||||||
Sbjct 1084 AAACCCAGCTCACGTTCCCTAT 1105
>seq468
Length=48502
Score = 96.9 bits (106), Expect = 6e-18
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 18222 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 18279
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854394976128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |