Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
95.1_202017-07-20] 588 sequences; 18,602,782 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq547 205 1e-50
seq546 205 1e-50
>seq547
Length=2605
Score = 205 bits (226), Expect = 1e-50
Identities = 162/192 (84%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1017 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 1076
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|||| |||||||||||||||||||||||| ||||||||||| |||||||||| | |||
Sbjct 1077 GGCGATTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCA 1136
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| | ||| |||||| || ||||| |||||| || | || |||| | | ||
Sbjct 1137 CACCCAGTAAAGAGCATACAGGACCACCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCC 1196
Query 184 GTGAGGCGGACC 195
|||||| |||||
Sbjct 1197 GTGAGGAGGACC 1208
>seq546
Length=3663
Score = 205 bits (226), Expect = 1e-50
Identities = 162/192 (84%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2780 CTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 2839
Query 66 GGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCA 125
|||| |||||||||||||||||||||||| ||||||||||| |||||||||| | |||
Sbjct 2840 GGCGATTGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAAAATTCCTGGTTCCCCTGCA 2899
Query 126 CA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGCC 183
|| ||| | ||| |||||| || ||||| |||||| || | || |||| | | ||
Sbjct 2900 CACCCAGTAAAGAGCATACAGGACCACCAGGAGGTAAGGTCCAGCAAGACAGTGCACTCC 2959
Query 184 GTGAGGCGGACC 195
|||||| |||||
Sbjct 2960 GTGAGGAGGACC 2971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595196609592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |