Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220 95.1_202017-07-20] 588 sequences; 18,602,782 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq547 221 1e-55 seq546 221 1e-55 >seq547 Length=2605 Score = 221 bits (244), Expect = 1e-55 Identities = 162/187 (87%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||| ||||||||||||||| ||||||||||||| | || |||||| Sbjct 1130 GGAACCAGGAATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATA 1071 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1070 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCG- 1012 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| |||||||| | |||||| ||| | ||||||||||| Sbjct 1011 CCGTAATGATTAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTC 952 Query 181 TTGGATT 187 || |||| Sbjct 951 TTAGATT 945 >seq546 Length=3663 Score = 221 bits (244), Expect = 1e-55 Identities = 162/187 (87%), Gaps = 1/187 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||||||||| |||||| ||||||||||||||| ||||||||||||| | || |||||| Sbjct 2893 GGAACCAGGAATTTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCAATCGCCCGAATA 2834 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 2833 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGATCG- 2775 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| |||||||| | |||||| ||| | ||||||||||| Sbjct 2774 CCGTAATGATTAATAGGGACGGTCGGGGGCATTGGTATTCCGTTGCTAGAGGTGAAATTC 2715 Query 181 TTGGATT 187 || |||| Sbjct 2714 TTAGATT 2708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511997083520