Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022220
95.1_202017-07-20] 588 sequences; 18,602,782 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq547 421 1e-115
seq546 421 1e-115
>seq547
Length=2605
Score = 421 bits (466), Expect = 1e-115
Identities = 283/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78
|| ||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||
Sbjct 539 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 480
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct 479 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 420
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
|||||||||||||||||||||||||||||||||| |||||| ||||| | | | ||||||
Sbjct 419 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 360
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 359 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 300
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||
Sbjct 299 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 240
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 239 CTGCCCTTTGTA 228
>seq546
Length=3663
Score = 421 bits (466), Expect = 1e-115
Identities = 283/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGG-CTTCTTA 78
|| ||||||||||||||||||||||| |||||| |||||||| ||||| | |||||||
Sbjct 2302 GAACGAGACCTTAACCTGCTAAATAGTCAGGCCGGCTTTGGCTGGTCGTATGACTTCTTA 2243
Query 79 GAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 137
|||||||| ||||| || || ||| |||||||||||||||||||||||||||||||||||
Sbjct 2242 GAGGGACTGTCGGCGTCTAGTCGACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCT 2183
Query 138 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATCACCTTGG 196
|||||||||||||||||||||||||||||||||| |||||| ||||| | | | ||||||
Sbjct 2182 TAGATGTTCTGGGCCGCACGCGCGCTACACTGACTGAGCCAGCGAGTCTTACCGCCTTGG 2123
Query 197 CCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTA 256
||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 2122 CCGAGAGGCCTGGGTAATCTTGTGAAACTCAGTCGTGCTGGGGATAGAGCATTGCAATTA 2063
Query 257 TTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCC 316
||||||||||||||||||| ||||||||||| | |||| |||| ||||||||||||||||
Sbjct 2062 TTGCTCTTCAACGAGGAATACCTAGTAAGCGTGAGTCACCAGCTCGCGTTGATTACGTCC 2003
Query 317 CTGCCCTTTGTA 328
||||||||||||
Sbjct 2002 CTGCCCTTTGTA 1991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947194430464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |