Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 15.1_202017-07-20] 588 sequences; 18,516,783 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq468 729 0.0 >seq468 Length=9985 Score = 729 bits (808), Expect = 0.0 Identities = 467/506 (92%), Gaps = 2/506 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 6920 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 6979 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6980 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 7039 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7040 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 7099 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 7100 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 7159 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||| |||||| ||| ||||| | ||||| Sbjct 7160 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 7219 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTA 359 ||||||||||||||||||||||||||| |||||| | | | || || ||||||||||| Sbjct 7220 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCTGTGCTCTTCCGATCTATTAGCTCTA 7279 Query 360 GAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATG 419 |||||||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||| Sbjct 7280 GAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAATG 7339 Query 420 AGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTT 478 |||||||||||||||||| |||| ||| | |||||||||||||| |||||||||||||| Sbjct 7340 AGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATTCATGGCTTAATCTT 7399 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 7400 TGAGACAAGCATATGACTACTGGCAG 7425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391118848