Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
45.1_202017-07-20] 511 sequences; 18,557,031 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq357 284 2e-74
>seq357
Length=4700
Score = 284 bits (314), Expect = 2e-74
Identities = 209/238 (88%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| |
Sbjct 2267 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 2324
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 2325 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACTGAGTTTCACAAGATT 2384
Query 120 ACCCGGACCTGTCGGCCAAGGTGATA-GACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| | ||| |||||||||| | || |||||| || | ||||||||||||||||||
Sbjct 2385 ACCCAGGCCTCTCGGCCAAGGCGGTAAGACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGC 2444
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 2445 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGACTA 2502
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996277365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |