Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
45.1_202017-07-20] 511 sequences; 18,557,031 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq346 468 9e-130
seq379 462 4e-128
seq312 96.9 6e-18
>seq346
Length=3727
Score = 468 bits (518), Expect = 9e-130
Identities = 276/286 (97%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 2150 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 2209
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2210 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 2269
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2270 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 2329
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 2330 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 2389
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2390 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 2435
>seq379
Length=19152
Score = 462 bits (512), Expect = 4e-128
Identities = 275/286 (96%), Gaps = 1/286 (0%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | |||| || |||||||||| ||||||||||||||||| ||||||||
Sbjct 1690 AATTACTATTACGACGACACTCCATCAGTAGGGAAAAACTAACCTGTCTCACGACGGTCT 1749
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1750 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1809
Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1869
Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1870 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1929
Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1930 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1975
>seq312
Length=48936
Score = 96.9 bits (106), Expect = 6e-18
Identities = 56/58 (97%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 18212 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 18269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854395634016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |