Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
45.1_202017-07-20] 511 sequences; 18,557,031 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq357 760 0.0
seq368 426 5e-117
>seq357
Length=4700
Score = 760 bits (842), Expect = 0.0
Identities = 475/507 (94%), Gaps = 3/507 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 3384 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 3443
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3444 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3503
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3504 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 3563
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 3564 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 3623
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||| |||||| ||| ||||| | |||||
Sbjct 3624 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 3683
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||
Sbjct 3684 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCT 3743
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||
Sbjct 3744 AGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAAT 3803
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477
||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||
Sbjct 3804 GAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCT 3863
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 3864 TTGAGACAAGCATATGACTACTGGCAG 3890
>seq368
Length=2996
Score = 426 bits (472), Expect = 5e-117
Identities = 284/312 (91%), Gaps = 3/312 (1%)
Strand=Plus/Plus
Query 196 ATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255
||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||
Sbjct 1 ATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCACAAGGCCATGCGATT 60
Query 256 CGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAA 315
|| |||||||||||| |||||| ||| ||||| | |||| |||||||||||||||
Sbjct 61 CGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGGTTTTTATCTAATAAA 120
Query 316 TACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373
|||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| |||
Sbjct 121 TACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCTAGAATTACCACAGTT 180
Query 374 ATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 433
|||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 181 ATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCAGTT 240
Query 434 TCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492
|||| |||| ||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 300
Query 493 GACTACTGGCAG 504
||||||||||||
Sbjct 301 GACTACTGGCAG 312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392281856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |