Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq512 529 7e-148
seq567 163 1e-37
>seq512
Length=8553
Score = 529 bits (586), Expect = 7e-148
Identities = 530/681 (78%), Gaps = 39/681 (6%)
Strand=Plus/Minus
Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93
||| |||||||| ||| |||||| || ||| | ||||||| |||||| | | |||||||
Sbjct 3537 TTCTACGAGTCGCGTTACTTGGGAGTGTAGCGCAAAATGGGTGGTAAACTCCATCTAAAG 3478
Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153
||||||||||| |||||||||||| ||||||| |||| |||||||||||||||||
Sbjct 3477 CTAAATATTGGTGGAAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACT 3418
Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213
||||||||||||||||| || |||||||||||||||||||||| || ||| | ||| |
Sbjct 3417 TTGGAAAGAGAGTTAAACAGTACGTGAAATTGTTGAAAGGGAAACGATTGAAGTCAGTCG 3358
Query 214 TGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCAT 273
|| | | | ||| || | || || |||| | || || | | || || |||
Sbjct 3357 TGTCTATTGG-GTTCAGCCAGT---TCTGCTGGTGTATTCC-CTTTAGACGGGTCAACAT 3303
Query 274 CAGCTCGGG-CGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAG 332
||| || | |||| |||||| ||| |||||||| || | |||||| | |||||||||
Sbjct 3302 CAGTTCTGATCGGT-GGATAAGGGCTGGGGGAATGTAGCACTCTTCGGAGTGTGTTATAG 3244
Query 333 CCC-------------------GGG---GTGGAATGCGGCCCGCCTGGA---CTGAGGTC 367
|| ||| | ||||||| || ||||| | | | |||
Sbjct 3243 CCTCCTGTCGCATACACTGGTTGGGACTGAGGAATGCAGCTCGCCTTTATGGCCGGGGTT 3184
Query 368 CGCGCTC---CG-GCT-AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACAC 422
||| | | || ||| |||||| || | ||||| | ||| || ||||||||| |||||
Sbjct 3183 CGCCCACGTTCGAGCTTAGGATGTTGACAAAATGGCTTTAAACGACCCGTCTTGAAACAC 3124
Query 423 GGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAA 482
||||||||||||||||||| | |||||||||||| ||||||||| || ||||||||||||
Sbjct 3123 GGACCAAGGAGTCTAACATATCTGCGAGTGTTTGAGTGTCAAACTCGAGCGCGTAATGAA 3064
Query 483 AGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGAT 542
|||||| | ||| |||| || | || ||||| ||||||||||| ||| | | ||||
Sbjct 3063 AGTGAATGTAGGAGGGATCCGC--AAGGAGCACCTTCGACCGATCCGGATCTTCTGGGAT 3006
Query 543 GGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 602
||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 3005 GGATTTGAGTAAGAGCATATATGCTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGG 2946
Query 603 GTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGT 662
| |||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||||
Sbjct 2945 GCGAAGCCAGGGGAAACTCTGGTGGAGGCTCGTAGCGATTCTGACGTGCAAATCGATCGT 2886
Query 663 CAAATTTGGGTATAGGGGCGA 683
| |||||||||||||||||||
Sbjct 2885 CGAATTTGGGTATAGGGGCGA 2865
>seq567
Length=131167
Score = 163 bits (180), Expect = 1e-37
Identities = 105/115 (91%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
|||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||
Sbjct 127791 TGGGACCCGAAAGATGGTGAGCTATGCCTGAATAGGGCTAAGCCAGGGGAAACTCTGGTG 127732
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||| | || ||||| ||||||||||||||||| ||||||||||||||||
Sbjct 127731 GAGGCTCGTAACGATTCTGACGTGCAAATCGATCGTCCGATTTGGGTATAGGGGC 127677
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079987408850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |