Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 55.1_202017-07-20] 587 sequences; 18,505,623 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq523 468 9e-130 seq512 468 9e-130 seq423 87.8 3e-15 >seq523 Length=18915 Score = 468 bits (518), Expect = 9e-130 Identities = 276/286 (97%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 1510 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1569 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1570 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 1629 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1630 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 1689 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1690 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1749 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1750 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1795 >seq512 Length=8553 Score = 468 bits (518), Expect = 9e-130 Identities = 276/286 (97%), Gaps = 1/286 (0%) Strand=Plus/Plus Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69 |||||| ||| | |||| || |||||||||||||||||||||||||||| |||||||| Sbjct 781 AATTACTATTACGACGACACTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 840 Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTT 900 Query 130 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 189 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 CGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTG 960 Query 190 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCG 249 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 961 GCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAACTCCG 1020 Query 250 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1021 AGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 1066 >seq423 Length=38487 Score = 87.8 bits (96), Expect = 3e-15 Identities = 56/60 (93%), Gaps = 2/60 (3%) Strand=Plus/Plus Query 77 GCTCACGTTCCC--TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 134 |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 18241 GCTCACGTTCCCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTA 18300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854394984672