Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
55.1_202017-07-20] 587 sequences; 18,505,623 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq523 125 1e-26
seq512 125 1e-26
>seq523
Length=18915
Score = 125 bits (138), Expect = 1e-26
Identities = 142/185 (77%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | ||| | ||||||||| |||||| ||||| || | |||| |
Sbjct 1502 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGTCTGTCCGATCGGGCAAT 1445
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| ||| || ||||||||||||||||||||||||||||||| | | |
Sbjct 1444 GACGCGAAGCTATCATACGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 1385
Query 121 GAACGGGGTGATTCT-CTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
||| | |||| | ||| |||||| |||| | | ||||||||||||| |||
Sbjct 1384 GAA-ACGACGATTTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGGCTTCGGCTGTGAA 1326
Query 180 CCTTA 184
|| ||
Sbjct 1325 CCATA 1321
>seq512
Length=8553
Score = 125 bits (138), Expect = 1e-26
Identities = 142/185 (77%), Gaps = 4/185 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| || | ||| | ||||||||| |||||| ||||| || | |||| |
Sbjct 773 GTACGAGAGGAACTGCTCA-TTC-GTATAATTGGTATTTGCGTCTGTCCGATCGGGCAAT 716
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
| |||||||||| ||| || ||||||||||||||||||||||||||||||| | | |
Sbjct 715 GACGCGAAGCTATCATACGCCAGATTATGGCTGAACGCCTCTAAGTCAGAATCTGTACTA 656
Query 121 GAACGGGGTGATTCT-CTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
||| | |||| | ||| |||||| |||| | | ||||||||||||| |||
Sbjct 655 GAA-ACGACGATTTTGGTCCCGCACATGTTAGTTGTGTTTAAATAGGCTTCGGCTGTGAA 597
Query 180 CCTTA 184
|| ||
Sbjct 596 CCATA 592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819195341568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |