Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 55.1_202017-07-20] 587 sequences; 18,505,623 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq512 760 0.0 >seq512 Length=8553 Score = 760 bits (842), Expect = 0.0 Identities = 475/507 (94%), Gaps = 3/507 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 5551 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 5610 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5611 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5670 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5671 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 5730 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 5731 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 5790 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||| |||||| ||| ||||| | ||||| Sbjct 5791 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 5850 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| Sbjct 5851 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCT 5910 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||| ||||||||||||| ||| ||| ||||||||||| |||||||||||||| Sbjct 5911 AGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAAT 5970 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||| Sbjct 5971 GAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCT 6030 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 6031 TTGAGACAAGCATATGACTACTGGCAG 6057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510391133952