Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221 65.1_202017-07-20] 497 sequences; 18,521,151 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq401 760 0.0 seq412 389 1e-105 >seq401 Length=8227 Score = 760 bits (842), Expect = 0.0 Identities = 475/507 (94%), Gaps = 3/507 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct 6920 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 6979 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6980 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 7039 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7040 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 7099 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 7100 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 7159 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||||||||||||| |||||||||||| |||||| ||| ||||| | ||||| Sbjct 7160 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 7219 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||| Sbjct 7220 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCT 7279 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 ||||||||||| ||||||||||||| ||| ||| ||||||||||| |||||||||||||| Sbjct 7280 AGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAAT 7339 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477 ||||||||||||||||||| |||| ||| | |||||||||||||||||||||||||||| Sbjct 7340 GAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCT 7399 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 7400 TTGAGACAAGCATATGACTACTGGCAG 7426 >seq412 Length=2786 Score = 389 bits (430), Expect = 1e-105 Identities = 260/286 (91%), Gaps = 3/286 (1%) Strand=Plus/Plus Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281 ||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||| | Sbjct 1 GAATGAAGCATCGCCGGCACAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAG 60 Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTT 340 || ||||| | |||||||||||||||||||||||||||||||| |||||||||| || Sbjct 61 AGGGCCGAAACCCATTGGTTTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTT 120 Query 341 TT-AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399 || ||||||||||||||||||||||||||| ||||||||||||| ||| ||| ||||||| Sbjct 121 TTCAGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAAT 180 Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458 |||| ||||||||||||||||||||||||||||||||| |||| ||| | ||||||||| Sbjct 181 AAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTA 240 Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510392493312