Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022221
65.1_202017-07-20] 497 sequences; 18,521,151 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq401 760 0.0
seq412 389 1e-105
>seq401
Length=8227
Score = 760 bits (842), Expect = 0.0
Identities = 475/507 (94%), Gaps = 3/507 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 6920 GTACTCATTCCAATTACAAGGCCCAAAAGAGCCCTGTATTGTTATTTATTGTCACTACCT 6979
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 6980 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 7039
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 7040 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 7099
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
|||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 7100 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCA 7159
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||||||||||||| |||||||||||| |||||| ||| ||||| | |||||
Sbjct 7160 CAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAGAGGGCCGAAACCCATTGGT 7219
Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTAGCATGTATTAGCTCT 358
||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||
Sbjct 7220 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTCAGCATGTATTAGCTCT 7279
Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418
||||||||||| ||||||||||||| ||| ||| ||||||||||| ||||||||||||||
Sbjct 7280 AGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAATAAACTATAACTGATTTAAT 7339
Query 419 GAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCT 477
||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||
Sbjct 7340 GAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTAGACATGCATGGCTTAATCT 7399
Query 478 TTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||
Sbjct 7400 TTGAGACAAGCATATGACTACTGGCAG 7426
>seq412
Length=2786
Score = 389 bits (430), Expect = 1e-105
Identities = 260/286 (91%), Gaps = 3/286 (1%)
Strand=Plus/Plus
Query 222 GAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281
||||||| |||||||||| ||||||||||||||||| |||||||||||| |||||| |
Sbjct 1 GAATGAAGCATCGCCGGCACAAGGCCATGCGATTCGAGAAGTTATTATGATTCACCATAG 60
Query 282 AGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTT 340
|| ||||| | |||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 61 AGGGCCGAAACCCATTGGTTTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTT 120
Query 341 TT-AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399
|| ||||||||||||||||||||||||||| ||||||||||||| ||| ||| |||||||
Sbjct 121 TTCAGCATGTATTAGCTCTAGAATTACCACAGTTATCCATGTAGCAAGATACCATCAAAT 180
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTA 458
|||| ||||||||||||||||||||||||||||||||| |||| ||| | |||||||||
Sbjct 181 AAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTATGAATTCGTTTATACTTA 240
Query 459 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510392493312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |