Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022222
45.1_202017-07-20] 465 sequences; 18,610,299 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq409 284 2e-74
>seq409
Length=6658
Score = 284 bits (314), Expect = 2e-74
Identities = 209/238 (88%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||||||| | |||||| ||||||||||| ||| |
Sbjct 3529 GTACAAAGGGCAGGGACGTAATCAACGCGAGCTGG-TGACTCACGCTTACTAGGTATT-C 3586
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
||||||||||| ||| |||||||||| |||||||||| ||||| | ||||| ||||||
Sbjct 3587 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACTGAGTTTCACAAGATT 3646
Query 120 ACCCGGACCTGTCGGCCAAGGTGATA-GACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178
|||| | ||| |||||||||| | || |||||| || | ||||||||||||||||||
Sbjct 3647 ACCCAGGCCTCTCGGCCAAGGCGGTAAGACTCGCTGGCTCAGTCAGTGTAGCGCGCGTGC 3706
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 3707 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGACTA 3764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751996612475
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