Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cryptococcus_20neoformans_20var._20grubii_20[genbank_20GCA_5F0022222
45.1_202017-07-20] 465 sequences; 18,610,299 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq413 277 3e-72
seq409 277 3e-72
seq412 170 3e-40
seq408 170 3e-40
seq346 98.7 2e-18
>seq413
Length=80568
Score = 277 bits (306), Expect = 3e-72
Identities = 158/161 (98%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 135 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 60
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct 61 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCCCCTCTAGCCTCAAACTCCGAGGGA 120
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 161
>seq409
Length=6658
Score = 277 bits (306), Expect = 3e-72
Identities = 158/161 (98%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 135 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 TGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGC 60
Query 195 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGA 254
||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||
Sbjct 61 CACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCCCCTCTAGCCTCAAACTCCGAGGGA 120
Query 255 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|||||||||||||||||||||||||||||||||||||||||
Sbjct 121 CTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 161
>seq412
Length=1553
Score = 170 bits (188), Expect = 3e-40
Identities = 107/114 (94%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | ||||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1440 AATTACTATTACGACGACGCTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1499
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATT 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATT 1553
>seq408
Length=1721
Score = 170 bits (188), Expect = 3e-40
Identities = 107/114 (94%), Gaps = 1/114 (1%)
Strand=Plus/Plus
Query 11 AATTACCATTGGGGCGACGGTC-ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCT 69
|||||| ||| | ||||| || |||||||||||||||||||||||||||| ||||||||
Sbjct 1608 AATTACTATTACGACGACGCTCCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCT 1667
Query 70 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATT 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1668 AAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATT 1721
>seq346
Length=48949
Score = 98.7 bits (108), Expect = 2e-18
Identities = 57/59 (97%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 77 GCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 18215 GCTCACGTTCCCTATTAAGGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 18273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854396027040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |